| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0094 |
|---|
| Symbol | fmt |
|---|
| ID | 3932304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 78013 |
|---|
| End bp | 78936 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637900250 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_505995 |
|---|
| Protein GI | 88608400 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAC TTTTTATGGG ATCATCCGCG TTTGCGGTTC CAACGCTTTT GAAACTCATA
GCAGACCCGC AATTCGAGGT CTTAGAGGTC TATACCAAAC CTCCAAAACC TAAGGGCCGC
GGCCTCTTAA CTTCGATGAC GCAAGTACAT TCGACATCTT TGGAGTATGG CCTTTCTGTA
AAAACACCTT TTTCTCTAAA AGGAGAGGAA CTTCCTCCTT GTGACGTAAT TGTTGTTGTC
TCTTATGGTC TTATCATACC AGCTAAATTA CTATCACATC CAAAGTTGGT ACCTCTTAAT
ATTCACCCAT CTCTTTTACC TAGATGGCGT GGTCCGTCGC CAATTCAATA TACAATCTTG
AAGGGAGATA AAGAGGCAGG CGTGTCTATA ATACGCGTCA CACCTGAACT AGATGCTGGA
GCGATATACA TACAAAAGGC TATTCCTCTT GATGGAACCG AGACATATTC AATTTTACAC
GATCGACTCG CGAATCTCGG TGCCTCAATG CTTCATGGCG TATTGGAAAC TTTGAACACA
ATCAGCCCTG TACCACAAGC TGAAGAACAA GCTACCTATT CAAAGAAACT TCCTAATTCA
GTAAGCATTG ATTTCTCTGA AGGGATAGCA TCATTTTTAA GAAAGCTAAG AGTTTTTGGT
GCTGTTTCAA TCGAGTTATT TGGCAAGCAC ATAAAGATAG TAGAAGTTTG CAAGACCGCG
GATTCACCAT CTGCTGATGT GGGTGTCAAA AAAGACTCTA AAAAGATCCT TCTTCAATTT
AAGGATGGAT GTGCAACCAT AAAAACGGTG AAACCAGAGA ATAAAAGGGA AATGTCCACA
GAAGATTTCC TCAACGGAAT ACAGAGTAAA TATGGGACCC ATGCTGACTC GCATGTTTTT
ATAGATTATA AAGAAAACTA TTAA
|
|---|
| Protein sequence | MKILFMGSSA FAVPTLLKLI ADPQFEVLEV YTKPPKPKGR GLLTSMTQVH STSLEYGLSV
KTPFSLKGEE LPPCDVIVVV SYGLIIPAKL LSHPKLVPLN IHPSLLPRWR GPSPIQYTIL
KGDKEAGVSI IRVTPELDAG AIYIQKAIPL DGTETYSILH DRLANLGASM LHGVLETLNT
ISPVPQAEEQ ATYSKKLPNS VSIDFSEGIA SFLRKLRVFG AVSIELFGKH IKIVEVCKTA
DSPSADVGVK KDSKKILLQF KDGCATIKTV KPENKREMST EDFLNGIQSK YGTHADSHVF
IDYKENY
|
|---|
| |