Gene NSE_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0088 
Symbol 
ID3931890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp75251 
End bp75754 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID637900244 
Producthypothetical protein 
Protein accessionYP_505989 
Protein GI88608078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTA TACCATGGGT TGCTATATTT GCAACTTATT TGCTTTTAAG GGCACATTTC 
AAATTCAATA GTATGAAGAT TATGATGTGT CTTGTTGTGC CCATTATAGT GTTGATTCCT
ATTACGATTT GTTGGATAAC GCGTTCAGGT GCGAGTTATG CGCAAGATAA AAAGGATGCT
AATACAAGTG GAGATACGCT GCTTAGAGTG GGTCTATGGG CTAGAGGTGC ATTAGTATTT
TTTCTGGCTC TGGCAGCCCT TTTTATTACT GGGTCCGTGG TCCTTGCATA TTTTACGGAT
AGTACTGAAG GGAAGCTTAA GGCTGCACTT CTGACTGGCG AAGCGGTGTG CACAGTCATT
TGCGCTGTGT TGCTATGTAT GGCGTTCTCT AGTCTCTGTG TTCAGGCTGC TTGCACATGT
GCTGGACCTG ATTCTAGCCT TTCCTCACAG GATTTGCCAC AATTAGCAGC TGGGAGGGCT
GTCTCCGTAA GCGGCGCAGC ATAA
 
Protein sequence
MRVIPWVAIF ATYLLLRAHF KFNSMKIMMC LVVPIIVLIP ITICWITRSG ASYAQDKKDA 
NTSGDTLLRV GLWARGALVF FLALAALFIT GSVVLAYFTD STEGKLKAAL LTGEAVCTVI
CAVLLCMAFS SLCVQAACTC AGPDSSLSSQ DLPQLAAGRA VSVSGAA