| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0067 |
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| Symbol | rho |
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| ID | 3931868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 59313 |
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| End bp | 60632 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637900223 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_505968 |
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| Protein GI | 88608814 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGTG ATCCTGAAAA GGTTATTAAC TTGTCTGACT TGCGTTCAAA AAGTGCACGA
GAGCTTTTAA CAATGGCAGA GTCATTAAAT TTGCAGAATC TAGCTGGGAT GTCAAAGCAG
GATCTGATAA TCCTCATAGC ACAGAGCGAA GTCGCAGACA GTCAAACCAA GAAGGTTATA
ATGAGTTCCG GCGTAGCTGA GGTCCTGAAC GAAGGTTTTG CCTTCATGCG ATCCTCTGTA
TATAACTATC TTGCGAACCA AGATGACATT TATATCTCAC CAGGACAGGT ACGAAGACTC
GGAATTAGGA CAGGTGACCT AATCTATGGC GAAGTAAGAG CTCCAAAAAA AGGCGAAAGG
TATTTTGCAC TTTCTAAGGC ATTGGAAATC AATAACAGTC CTGCGTCTGT TGCCAGAAGG
TATGTTGCCT TCGAGAGTTT GGTTCCTCTT TATCCAGATA CTCCAATAAA GCTTGAATGT
GAAAAGTCCA CACGGCCTGT GGAGTCAAAA AACTGTGACT TAAGCGGTAG GATTATTGAT
ATCGTTGCTC CGCTCGGAAG AGGACAAAGA GCGCTTATAG TTGCACAACC AAAAACTGGT
AAGACTATTC TCCTGCAAAA CATCGCGCAC TCTATTTCTG CGAACTATCC GGATATACAC
TTGATAATCC TCCTCATTGA TGAGCGACCA GAAGAGGTCA CCGATATGCG CAGGTCAGTA
AATGCAGAGG TCGTGAGCTC GACATTCGAC GAACCAGCGG ACAAACACGT ATACGTTGCC
GAATTTGCAA TTGAAAAAGC AAAAAGACTG GTCGAACAGG GAAAACACGT CGTTATTTTA
CTTGATTCGA TTACTCGTTT GGCCAGGGCA TACAATTCTG TTGTTCCGTC TTCTGGCAAA
CTTTTGAGTG GCGGTGTTGA TTCCAATGCC CTTCAAAAAG CAAAGCGTCT CTTCGGAGCG
GCACGCAATA TTGAGGGAGG TGGGTCCTTG ACTATTATTG GAACTGCGCT TGTAGATACT
GGCTCAAGGA TGGACGAACT TATTTACGAA GAGTTTAAGG GTACTGGTAA CTCCGAAATA
ATTCTTGATA GGAAGCTTGC AGAAAAGCGT CTGTTTCCAG CGATTGATAT AACTAAGTCA
GGCACAAGAA AAGAAGAACT CCTTCTAGAA CGCTCTATCC TGAACAAAGT TTGGGTCTTG
AGACGGATTC TTAACCAGAT GACGGATGCA GATGCAATCG AATTCATAAT AGACAAGCTG
CAAAGAACGA AAAATAACGA AGAGTTTTTC CTCTTTATGG ATAAAAAAGT TAACAACTGA
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| Protein sequence | MTSDPEKVIN LSDLRSKSAR ELLTMAESLN LQNLAGMSKQ DLIILIAQSE VADSQTKKVI
MSSGVAEVLN EGFAFMRSSV YNYLANQDDI YISPGQVRRL GIRTGDLIYG EVRAPKKGER
YFALSKALEI NNSPASVARR YVAFESLVPL YPDTPIKLEC EKSTRPVESK NCDLSGRIID
IVAPLGRGQR ALIVAQPKTG KTILLQNIAH SISANYPDIH LIILLIDERP EEVTDMRRSV
NAEVVSSTFD EPADKHVYVA EFAIEKAKRL VEQGKHVVIL LDSITRLARA YNSVVPSSGK
LLSGGVDSNA LQKAKRLFGA ARNIEGGGSL TIIGTALVDT GSRMDELIYE EFKGTGNSEI
ILDRKLAEKR LFPAIDITKS GTRKEELLLE RSILNKVWVL RRILNQMTDA DAIEFIIDKL
QRTKNNEEFF LFMDKKVNN
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