Gene NSE_0066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0066 
Symbol 
ID3931493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp58542 
End bp59210 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content37% 
IMG OID637900222 
Productputative lipoprotein 
Protein accessionYP_505967 
Protein GI88608037 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.247976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CTTTTGTTCT CTGCATTTTA ATCTCTTTCT TTTTGGGTTG TTGGCAAGTA 
AAGAGGTTCC TTTTTAAACG TGAGGCATAT GAAAATATTA CAACGTGCCA TGCTACCACC
CTAGGTGATC CACGCAAATA CTGTAATTTT GTTGGTAAGC TTAGTTTCTA CGAATATGGT
GATATTTATC TCCTCTATAA GGATTCCAGG CATTTCAATA TACTCGTTCC ATTTGCTGCT
GAGGGGAAAG TTGTTCTAGT GAATGTCGGT TATGTTAGGA AAGAAGAAAA AGATAGGGCA
AGAGAGATGA TTCTCCAGAT CTTAAAATCT CACAAAGAGT TTGTTTTCAA AGGTTACTTA
TCTCCAGTAA GAGGATCTAA AATTCCTCTT GTCAGAAACG ACGTTACTAA TTTAGAACTT
TATTCTCTAG ATATGAAAGA AATTGGGTCG AATTTTAGGT TACCAGTTCT AGAATATATT
CTGTACTCAA CTTCGAATGA TTTTATCGCG ATCTATCCTG AGATGATTTT ATCACTTCAG
AGGCCGCAGC TGAAAATAAT GATGCACTTC TGGTATGCGT TCATGTGGTA TGCAGTTGCG
TGTATCGGAC TGATTTACTA TTTCTTTGGC TCGAGAAAGA TAGCACAGAC CTCACCTTCC
AATGAATAA
 
Protein sequence
MEKAFVLCIL ISFFLGCWQV KRFLFKREAY ENITTCHATT LGDPRKYCNF VGKLSFYEYG 
DIYLLYKDSR HFNILVPFAA EGKVVLVNVG YVRKEEKDRA REMILQILKS HKEFVFKGYL
SPVRGSKIPL VRNDVTNLEL YSLDMKEIGS NFRLPVLEYI LYSTSNDFIA IYPEMILSLQ
RPQLKIMMHF WYAFMWYAVA CIGLIYYFFG SRKIAQTSPS NE