Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0064 |
Symbol | |
ID | 3931833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 56119 |
End bp | 57312 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637900220 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_505965 |
Protein GI | 88608332 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.834024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCGTT TTTTGCACGT GGTTTTGATC ACGTTTGTCG TCTTCGTAGC AGATGTCGCA GTGGAAATTT ATGTTCCTGC GCTGCCAAGT ATTGGTGTTT TTTTTTCGGC AACAGCAATG GCTGTGAAGG CAAGTATAAG TAGTAATATA TTGGGTCTAG CTCTTTCTAG CCTCTTTTGG GGTACGGTTT CTGATTTATG GGGAAGAAAA CTTGCTTTGC TTTTAGGTTC GTTAGTTTTT GTTGTTTCTA GTGTTCTTTG TATTTTTTCT GCTTCGATCG ATGCATTGGT TTTCTTCAGG TTTCTACAAG GTATTGGGCA AGGTGTTGCA GTAGTTGTAG GTTTCGCTAG CGTGAAAGAT TTTTATTCTG GTGAAAAATG TGCGCAGGTT ATTTCTAAAT TATCTTCTGT GGTTGCGGTC TCTCCGACGT TTGCGCCTAT TTTAGGTACT GTTATCCTTT TTTATTTCAG TTGGCACTAT ATTTTCTTGT TTCTTGCCTC ACTAGGATTG GTGTGTCTGT TGCTATTAGT TTTCTTTTTT CAAGATACGC TAAAGGAGAG AAATCCCGCT TCACTAAGGG GTCTTCTTAA TTCTTATATT CGAATAGCGA CTAATAAAAG TTACGTCCTT TATTCTGCCA TAACAGTGAT TACTTTCATG TGGCTCTGGA ATGTTATCAG TTCTGCTCCT TTTTTATTAC TCGAAGATAT GGGTGTTACA ATCCAGGAAT ACGGGTATCT GGTAGCAATT AACGTGATGG GTTTCTTACT GGGTACAATC TTAAACAGTA AATATATTCC AAAGGTAGGG CTCAAGAAGT TGGTAGCATT TGGATTAGCT CTTCCGCTAC TTAGTGAGGT GTTGCTTATT CTTCTTCATT ACACTACTGG GTTTTCACCA CTTATACTTG AATGTATATG GTTTTTCAGC GCTATGGGAC TTGCGTTCGT AATTGGGAAT TCAACTACGC TTGCTCTTGA CCAAGTTGGT GAATCTAACA ATGGCAAAGC TACTGCACTC CTAGTATGTT CGGAAATGGC GCTGGGTTCA TTGAGTGTCT ACTTAAATGC ACCTTTTTAT GATGGGACAA TAGTTCCGCT GTCGTTATTC ACAATTGTGT CAGTTCTTGC AAGTATGATA GTGTTCTACT ATGCAGTGAG GAATCCCGGT AATACCGTAA AACCAGCTAG ATAG
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Protein sequence | MNRFLHVVLI TFVVFVADVA VEIYVPALPS IGVFFSATAM AVKASISSNI LGLALSSLFW GTVSDLWGRK LALLLGSLVF VVSSVLCIFS ASIDALVFFR FLQGIGQGVA VVVGFASVKD FYSGEKCAQV ISKLSSVVAV SPTFAPILGT VILFYFSWHY IFLFLASLGL VCLLLLVFFF QDTLKERNPA SLRGLLNSYI RIATNKSYVL YSAITVITFM WLWNVISSAP FLLLEDMGVT IQEYGYLVAI NVMGFLLGTI LNSKYIPKVG LKKLVAFGLA LPLLSEVLLI LLHYTTGFSP LILECIWFFS AMGLAFVIGN STTLALDQVG ESNNGKATAL LVCSEMALGS LSVYLNAPFY DGTIVPLSLF TIVSVLASMI VFYYAVRNPG NTVKPAR
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