Gene NSE_0055 details

Gene Information

• Locus tag: NSE_0055
• ID: 3931980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 47265
• End bp: 47924
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637900211
• Product: putative osmotically inducible protein
• Protein accession: YP_505956
• Protein GI: 88608109
• COG category: [R] General function prediction only
• COG ID: [COG2823] Predicted periplasmic or secreted lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATAGTAG TATTGCGATT GTTTGGTGTT CTGCTATCTT TTACTTCCTG CTCTCCCCTT 
TTGGAAATGC GTACTTACGT GACTTTTTTG TTCTTGGCTG TGTTTTGTTT GCCTGCCTGT 
ACTCCACTTC TAATAGGAAC GACAGCTGCT ACAGTTGCTG TAACCTCAAT TCAGGATAAG 
GGAACAGGTG AGGTTATCGA TGATGAAGCT ATTTTATCTA GAGTGTCTGG AGTTATTTCT 
AGTAAGAACT TTTGCAGAGA TCTTACTGTC TCTGTAAACG AGGGTAGTGT ACTTATTTAT 
GGTAGCGTGC GTAATTCAAC AGATAGAGTG GCAGCAAGTA AACTTGTGTG GTCACAGGAG 
GGAGTGCGTG AAGTGATAAA TGAGATACAG GTACAAGATA GGGAAGAATC TTTTGCTGAA 
TCTGCGTGGA TTGCAGCACA AATAAAGTTA GCTCTCCTAC TGAAGAGTTC TGTGAAATCT 
TTCAGTTATA CTGTTGAGGT AGTAGACGGG ACAGTGTATC TTCTGGGAGT CGCGCAAAGC 
AAAGAGGAGT TTAGTAGAGT TTACGACATT GCAAAGCGTA TTGAAGGTGT AAAAGGAGTT 
GTAAGCTATG TCAGACTCAA AAGCAGTACC GGGATCCCTC TCCAATTGCA CAAACACTAA 

 

Protein sequence

MIVVLRLFGV LLSFTSCSPL LEMRTYVTFL FLAVFCLPAC TPLLIGTTAA TVAVTSIQDK 
GTGEVIDDEA ILSRVSGVIS SKNFCRDLTV SVNEGSVLIY GSVRNSTDRV AASKLVWSQE 
GVREVINEIQ VQDREESFAE SAWIAAQIKL ALLLKSSVKS FSYTVEVVDG TVYLLGVAQS 
KEEFSRVYDI AKRIEGVKGV VSYVRLKSST GIPLQLHKH