Gene NSE_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0054 
SymbolnuoH 
ID3931707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp46226 
End bp47236 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID637900210 
ProductNADH dehydrogenase I, H subunit 
Protein accessionYP_505955 
Protein GI88608314 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTATC TTGTTCTCTC TAAGCTTGTT TGGATAGTAC TGCTTGCAAT AGTCTTGATA 
CTTTGTGTGG CCTACCTGAC ATATGCAGAG AGAAAGGTAA TAGCAGCAAC ACAACTTCGT
GTCGGTCCCG ACTTGGTAGG GCCGTTTGGA CTTCTGCAAC CGATTGCTGA TGCTATAAAG
GTTTTGCTTA AGGAGATAAT TATTCCGAAT GCTGCCAGCC CAAAACTGTT TTTATTCGCC
CCAGTAATCA TATTTGTGTT GGCGTTGGTA GGGTGGGCAG TCATACCGTT TGGGACATCC
GAAATAGACG GTGTAGAAGT GCCAACTGTA ATTGCAAATG TTAATCTCGG GGTTATGTAT
CTTCTTGGTG TTGCCGCGCT TGAGGTTTAC GGAACGATCA TTGCAGGTTG GGCAAGTAAA
TCTAGTTATT CATTTTTGGG AGCACTTAGG TCGGCTTCTC AGATGATTTC ATATGAGATT
GTTATAGCGC CAGTAGTCAT GACGGTTATA CTGCTCACTG GCTCTCTTAA CCTGGCCGAG
ATAGTGGTGA TAAAGCACAG TCTGCCATAT TGGGTCGATA TCTTGATGTT GCCCATGACT
TTTATATTTT TTGTTTCGAT TCTTGCAGAA ACAAACAGAC ATCCTTTCGA TTTACCCGAG
GCAGAAGCTG AGCTAGTTTC GGGTTACAAT GTCGAGTATT CATCTATTCC TTTTGCGCTT
TTCTTTCTTG GGGAGTATGC AAATATGATA TTGAGCAGTA GCATAATGGC GACGCTGTTT
TTAGGTGGGT GGTATCCGCC AATTAACTGG TGGGGTTTAT CCATTGTTCC GGGCTTTATC
TGGTTTATTC TGAAGATTGT ATTTGTTTTG TTTTGTTTTC TGATTGTCAG AGCAACGCTC
CCACGTTACA GATATGACCA GTTAATGAGG TTGTGTTGGA AGGTATTTCT GCCGGTGACG
TTACTCTGGA TAGTTGTTAT AGGTGGATTG GTAGCTTTTA ACATTGTTTG A
 
Protein sequence
MLYLVLSKLV WIVLLAIVLI LCVAYLTYAE RKVIAATQLR VGPDLVGPFG LLQPIADAIK 
VLLKEIIIPN AASPKLFLFA PVIIFVLALV GWAVIPFGTS EIDGVEVPTV IANVNLGVMY
LLGVAALEVY GTIIAGWASK SSYSFLGALR SASQMISYEI VIAPVVMTVI LLTGSLNLAE
IVVIKHSLPY WVDILMLPMT FIFFVSILAE TNRHPFDLPE AEAELVSGYN VEYSSIPFAL
FFLGEYANMI LSSSIMATLF LGGWYPPINW WGLSIVPGFI WFILKIVFVL FCFLIVRATL
PRYRYDQLMR LCWKVFLPVT LLWIVVIGGL VAFNIV