Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0050 |
Symbol | |
ID | 3931386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 40371 |
End bp | 41126 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637900206 |
Product | putative membrane proetin |
Protein accession | YP_505951 |
Protein GI | 88608506 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATAATG GATGTTTGTT TGTTCGTAGC TATTTTGCTT ATATGAGTTT TATCAACCGT TATTCTTCTA CTTCAACAGA TTCTGCTTAT AGAAACGAAG GGCTGAGAAT GTATATGGTG AAGGTCTTCA ACTATATGGC TGCGGCTCTT GGGATAACTG GTCTAACTGC TTTCTTTGTT GCAAGCTCTC CGGCTATGCT CTCCTTGTTG TATCAAACAC CACTCCAGTG GGTCGTGATG TTTGCCCCTG TAGTGTTTGT TATAGTCTTT AGTACGAGGA TTTCAGGTAT GACCTCCGAA AGAGCGAAAG TTTTGTTCTG GTGCTTCTCG GTGCTTATGG GACTTTCTCT ATCTTGGGTG TTCATTGCTT ATACTGGCGC TAGCATAGCG AGGGTCTTTT TTATTGCAGC GACGATGTTT GGAGCAATGG CAATATACGG GAATAATACT AGGACAGATT TGACGGGAAT GGGCTCTTTT CTTACGATGG GAGTCGTGGG TATTCTGATT GCTGCTTTGG TGAATGTCTT TCTTGCTAGT CCAGCTATTT ATTTCGCTGT GTCCGCGCTT GGTGTTGTGA TATTTACTGG TCTTACCGCT TATGATGTAC AGCGCATTAG GGATTTTTAT TATTTCTCTG TCAATGCAGA TGAAGAGACA CTTTCGAAGA TCGCTGTAGT TGGTGCACTT ACACTATACT TCGATTTTAT TAATATTTTT ATTAGCTTAC TAAACCTCAT GGGTGAGCGG AAGTAG
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Protein sequence | MYNGCLFVRS YFAYMSFINR YSSTSTDSAY RNEGLRMYMV KVFNYMAAAL GITGLTAFFV ASSPAMLSLL YQTPLQWVVM FAPVVFVIVF STRISGMTSE RAKVLFWCFS VLMGLSLSWV FIAYTGASIA RVFFIAATMF GAMAIYGNNT RTDLTGMGSF LTMGVVGILI AALVNVFLAS PAIYFAVSAL GVVIFTGLTA YDVQRIRDFY YFSVNADEET LSKIAVVGAL TLYFDFINIF ISLLNLMGER K
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