Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0040 |
Symbol | ribF |
ID | 3931626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 30303 |
End bp | 31214 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637900196 |
Product | riboflavin biosynthesis protein RibF |
Protein accession | YP_505942 |
Protein GI | 88608739 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0196] FAD synthase |
TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0153472 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGTTT ACCATACTCC CGAGCTGCTT CCCCACCCTT CAGTCGTTAC CTTTGGTAAC TTTGACGGGG TACATTTAGG GCATCTGGCC TTGCTCTCTG CGCTGTCCGG TGTCAGTAAG TTAGCTGATT TACATAGGGT TGTCATCACT TTTGATCCTC ATCCATTCTG TTTTCTTAAG CGCAAAAAGG ACTTCCTTAT TACAGATCAG TACACTAAAA CAGTTCTCCT TTCTCCATAT GCGGATTCTC TATATTTCAT AAAGTTCGAT GATGAGCTTA GGAGTTTGTC TCCCGAGGAT TTTCTGAAAT TTCTGTCTTC TTTTCTGAAT CTCAAATACC TTATAAACGC CGAAAATTGC AGATTCGGAA AGTTTAGTTC CGGTGGCATA GCTGAAATAG AAAAATATCA GGAATTGCTT TCATATAAGG CTGTAGTCAT AAAGCCCGAG CTTAACGATT CTGGCAGTAG GTACTCCTCT ACTCTGGTCC GGACAAGCAT CAAGGATGGT GATATGCTGA GTGCAAGGCA ACTCTTGGGG CGGTATCACA GTATACGTGG CATTATTCGG AGAGATAGGG GCCTTGCTAG TACTATTGGT TTTCCCACAA TCAATATTGC AATTCCCGAG GAGATAATTA AGCCAAGACT TGGTGTGTAC GTGGTTGATG TTTCCATAGA AGGTACTATA CATAGGGGCA TAGCAAATAT TGGTAAAAGA CCCACTACCT CTGGCAGTGG TGAAGTTATC TTAGAAGTGC ATATTTTTAA CTTCTCTGAC AATGTATATG GCAAAGATGC AACAGTGTAT CTAAAGGCTT TTCTACGAGA AGAAAAGCTT TTTCCGTCTG TTGAGAGACT AAGAGAGCAA ATCCTAGCAG ATATCCGCGC TGTCCTTTCT ATGAATTTCT AA
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Protein sequence | MQVYHTPELL PHPSVVTFGN FDGVHLGHLA LLSALSGVSK LADLHRVVIT FDPHPFCFLK RKKDFLITDQ YTKTVLLSPY ADSLYFIKFD DELRSLSPED FLKFLSSFLN LKYLINAENC RFGKFSSGGI AEIEKYQELL SYKAVVIKPE LNDSGSRYSS TLVRTSIKDG DMLSARQLLG RYHSIRGIIR RDRGLASTIG FPTINIAIPE EIIKPRLGVY VVDVSIEGTI HRGIANIGKR PTTSGSGEVI LEVHIFNFSD NVYGKDATVY LKAFLREEKL FPSVERLREQ ILADIRAVLS MNF
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