| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0036 |
|---|
| Symbol | |
|---|
| ID | 3932030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 28338 |
|---|
| End bp | 29021 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637900192 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_505938 |
|---|
| Protein GI | 88608373 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTCCTAA ATGTTGAAAC TATAGAAAAA GGTACAAAAA TCTGTATAGA TCCGAAAAAA
CAGCATTACC TATTCTCAGT GATGCGCTTA CAAAAAGAAG GTCAGGTTAT AGTGTTCAAC
GGCAGGAGTG GTGAGTGGAT AGCAAAAGTT AACCACAATT TTTTGGTACC TGATATACAA
ATTCGACCAC AAACAGCAAG TTACCCATAT GATATCAATT TGTGCTTTGC AGTCCCAAAA
CACAAAGCGC TTAAGGAAAT TGTTAGACAG GCGACAGAGC TAGATGTCAC AGTGCTACGG
CCAATATACT CATCGCGCAC GGAAAATAAG AACAAGGATC TCGAAAAACT TGAGCTTTGG
GCAATCGAAG CGGCACAACA ATGTCGTCGG ATGAGTATAC CCGTTCTACT ACCACCCATC
GCACTAAAGG AAGTAGAAAC ATATCATGAA AACGTGTTCA TTTGCGATGA AACACTTTCT
GACTCTGTTA TCTGCGATAT TCCTATCTTA AGCTCTTACA CTATAGTCAT TGGGCCAGAA
GGAGGATTTT CCCATGAAGA ACTCTCCTTG ATTAACAAAA GAATCTCGCT AGGCAGAACT
ATATTGCGTT GTAGCACCGC AGCAACTTCT GCAATAGCTC AGGTAAGGTC TGTGTATAGC
CACCTCACGC GAACTCCTAA ATGA
|
|---|
| Protein sequence | MFLNVETIEK GTKICIDPKK QHYLFSVMRL QKEGQVIVFN GRSGEWIAKV NHNFLVPDIQ
IRPQTASYPY DINLCFAVPK HKALKEIVRQ ATELDVTVLR PIYSSRTENK NKDLEKLELW
AIEAAQQCRR MSIPVLLPPI ALKEVETYHE NVFICDETLS DSVICDIPIL SSYTIVIGPE
GGFSHEELSL INKRISLGRT ILRCSTAATS AIAQVRSVYS HLTRTPK
|
|---|
| |