Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0003 |
Symbol | |
ID | 3931729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 2237 |
End bp | 3580 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637900160 |
Product | sensor histidine kinase |
Protein accession | YP_505906 |
Protein GI | 88608550 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0648198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAACT ATATAAAGTC GTTCATCCTC ATTGTAGTGA CAATACTACT GACTTCTTTC CTTGGGTATA TAAAGACAGA AAAAACCCTT CTCGAAAGCA GCACAGAGAG GAATGCGGTG AATATTAGGA ATATTTTTAA TAGACTAATA TGGGAAAAAT ACTCCTTTAT GCTTGAAATG TATGACTTTG AGCCTACAAA AATGTATGAA AAGCCTCAAT TCATGTACTT TGAGAGCGAA GCGAAGTTAC TTTTTGAACC ACTGGATGTT ATTCAAGTTG AAATATTTTA CAAAGGTGAA ACAAGAGTTT TTAGTCTCAA CAAATATCTA GAACATGCAC ACCATCCGTA TAATCATGAC CTAAATAACA ATATTTCTTC CACCTCTATC GACAACGCGG GAAATATAGT AGTCACAGTG GCTTTGAACC CAGAAGAAAA TCCCCCGTCG GTTATTGAAA TTACATACGA TGCAAAGAGC CTTATAAGGC CTTTCCGCAT TACATGGATA GGCTTCACAC TTGTCGTATT GTTCATTTGC TCATCCTTAT TTTTCTGGAG CGTAATGAAA ATCAGGGAAA GCTCTAAGGT CTTGAACGAA CAGTTTTCGA TAAACACGAA ACTAAAAAAA GCCAAAGAAA GTATAGAAGA AATAAGTTCC CAAAAATCAC AATTTCTAGC GAATGTTAGT CACGAACTAA AAACACCTTT AAACGCAATA ATAGGTTTCT CAGATCTGAT ACGCACAGCA GAAGTGCTTG GTACTGAACA TAGAGAATAT GCAAATGATA TCTATTATTC AGGGAATCAC CTGTTAAATT TGATTAACGA CATTCTCGAT TTTTCAAAGT CAGAGTTAAA CAACTTGGAA ATAAAACCAA CATTGTTTGA TTTAGTACGC TTGACTGAGA CTTGTATCAG GATGACAACA ACTAAAAGAA AAGAGATAAA AATAGTGAAG AGTTTCTTTT CAAATAAGAT ACTTATCAAA AGCGATCATA AGAGGGTAAA ACAAGTAATC CTAAATATAC TTTCAAACTC GATAAAATTC ACGAATGAAG ATGGCTTAAT AAGAATTTCT ATAATCAGAT TACCTTCAGA GATTGAAATT GAAATTTCAG ATAATGGTGT TGGTATACCA GAAAAAGATA TAGCAAAGGC ACTCTCTGTA TTTGGCCAAT CAAATACGGA GCTATCAAGA AAATACGACG GAGCTGGAAT AGGGTTACCA CTTAGCAAGA AACTGGTAGA GTTGATGGGT GGAGTATTCG AGATTGAAAG CAAGGAGGGA AGCGGCACCG TCGTTAAAAT AAGGCTTCCG TATAGAGAAA GCAACGCCGC TTAA
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Protein sequence | MFNYIKSFIL IVVTILLTSF LGYIKTEKTL LESSTERNAV NIRNIFNRLI WEKYSFMLEM YDFEPTKMYE KPQFMYFESE AKLLFEPLDV IQVEIFYKGE TRVFSLNKYL EHAHHPYNHD LNNNISSTSI DNAGNIVVTV ALNPEENPPS VIEITYDAKS LIRPFRITWI GFTLVVLFIC SSLFFWSVMK IRESSKVLNE QFSINTKLKK AKESIEEISS QKSQFLANVS HELKTPLNAI IGFSDLIRTA EVLGTEHREY ANDIYYSGNH LLNLINDILD FSKSELNNLE IKPTLFDLVR LTETCIRMTT TKRKEIKIVK SFFSNKILIK SDHKRVKQVI LNILSNSIKF TNEDGLIRIS IIRLPSEIEI EISDNGVGIP EKDIAKALSV FGQSNTELSR KYDGAGIGLP LSKKLVELMG GVFEIESKEG SGTVVKIRLP YRESNAA
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