Gene NSE_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0003 
Symbol 
ID3931729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp2237 
End bp3580 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content35% 
IMG OID637900160 
Productsensor histidine kinase 
Protein accessionYP_505906 
Protein GI88608550 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0648198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACT ATATAAAGTC GTTCATCCTC ATTGTAGTGA CAATACTACT GACTTCTTTC 
CTTGGGTATA TAAAGACAGA AAAAACCCTT CTCGAAAGCA GCACAGAGAG GAATGCGGTG
AATATTAGGA ATATTTTTAA TAGACTAATA TGGGAAAAAT ACTCCTTTAT GCTTGAAATG
TATGACTTTG AGCCTACAAA AATGTATGAA AAGCCTCAAT TCATGTACTT TGAGAGCGAA
GCGAAGTTAC TTTTTGAACC ACTGGATGTT ATTCAAGTTG AAATATTTTA CAAAGGTGAA
ACAAGAGTTT TTAGTCTCAA CAAATATCTA GAACATGCAC ACCATCCGTA TAATCATGAC
CTAAATAACA ATATTTCTTC CACCTCTATC GACAACGCGG GAAATATAGT AGTCACAGTG
GCTTTGAACC CAGAAGAAAA TCCCCCGTCG GTTATTGAAA TTACATACGA TGCAAAGAGC
CTTATAAGGC CTTTCCGCAT TACATGGATA GGCTTCACAC TTGTCGTATT GTTCATTTGC
TCATCCTTAT TTTTCTGGAG CGTAATGAAA ATCAGGGAAA GCTCTAAGGT CTTGAACGAA
CAGTTTTCGA TAAACACGAA ACTAAAAAAA GCCAAAGAAA GTATAGAAGA AATAAGTTCC
CAAAAATCAC AATTTCTAGC GAATGTTAGT CACGAACTAA AAACACCTTT AAACGCAATA
ATAGGTTTCT CAGATCTGAT ACGCACAGCA GAAGTGCTTG GTACTGAACA TAGAGAATAT
GCAAATGATA TCTATTATTC AGGGAATCAC CTGTTAAATT TGATTAACGA CATTCTCGAT
TTTTCAAAGT CAGAGTTAAA CAACTTGGAA ATAAAACCAA CATTGTTTGA TTTAGTACGC
TTGACTGAGA CTTGTATCAG GATGACAACA ACTAAAAGAA AAGAGATAAA AATAGTGAAG
AGTTTCTTTT CAAATAAGAT ACTTATCAAA AGCGATCATA AGAGGGTAAA ACAAGTAATC
CTAAATATAC TTTCAAACTC GATAAAATTC ACGAATGAAG ATGGCTTAAT AAGAATTTCT
ATAATCAGAT TACCTTCAGA GATTGAAATT GAAATTTCAG ATAATGGTGT TGGTATACCA
GAAAAAGATA TAGCAAAGGC ACTCTCTGTA TTTGGCCAAT CAAATACGGA GCTATCAAGA
AAATACGACG GAGCTGGAAT AGGGTTACCA CTTAGCAAGA AACTGGTAGA GTTGATGGGT
GGAGTATTCG AGATTGAAAG CAAGGAGGGA AGCGGCACCG TCGTTAAAAT AAGGCTTCCG
TATAGAGAAA GCAACGCCGC TTAA
 
Protein sequence
MFNYIKSFIL IVVTILLTSF LGYIKTEKTL LESSTERNAV NIRNIFNRLI WEKYSFMLEM 
YDFEPTKMYE KPQFMYFESE AKLLFEPLDV IQVEIFYKGE TRVFSLNKYL EHAHHPYNHD
LNNNISSTSI DNAGNIVVTV ALNPEENPPS VIEITYDAKS LIRPFRITWI GFTLVVLFIC
SSLFFWSVMK IRESSKVLNE QFSINTKLKK AKESIEEISS QKSQFLANVS HELKTPLNAI
IGFSDLIRTA EVLGTEHREY ANDIYYSGNH LLNLINDILD FSKSELNNLE IKPTLFDLVR
LTETCIRMTT TKRKEIKIVK SFFSNKILIK SDHKRVKQVI LNILSNSIKF TNEDGLIRIS
IIRLPSEIEI EISDNGVGIP EKDIAKALSV FGQSNTELSR KYDGAGIGLP LSKKLVELMG
GVFEIESKEG SGTVVKIRLP YRESNAA