Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3236 |
Symbol | |
ID | 3922129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3540205 |
End bp | 3541443 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637898851 |
Product | putative transcriptional regulator |
Protein accession | YP_504637 |
Protein GI | 88604459 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.43358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACAA AAGATCTGCT GGAGATAATC TCTCATGGTG AGAACTCAGG GGTCGAGTTC AAGCGAGATG ATGTGAGACC TGAGCAACTT GCGAAAGAGA TTGTGGCTCT TGCAAATCAT CGCGGCGGTA TGATCCTCCT TGGTGTAGAG GATGACGGAA CCATCAGTGG AGTTCAGCGT GATAATCTGG AGACCTGGAT ATTTGACACC GTTTTTGGAC GGTACGTCCA CCCTATGATT CTTCCCTTTT ATGAAACGGT CCGGATTGAA CCGGGGAAGC AGGTTGCAGT TATATCGTTT CCTGAAGGCA CGTCAAAACC GTATGTTCTC CGAAATAATG ACCGGGAAGA GATCTATATC AGGGCTGGTT CAACCTCAAG ACTTGCGACC CGTGAACAGC AGGCACGACT GTTTGCTGCC GGGGGGATTT TACACACTGA ACTCCTCCCG GTTCCGGGAA CCTCATTCCA GTCCCTTGAC CTTACCCGAA TCCGGGAATA TCTCACTCAT ATTATCCATG ATCCGGAGAT TCCTGACAAA GATGAAGACT GGATACGAAG GCTCACCGGA CTTGGGATGC TCACGACCGT CTCTGGAGAC AGAGTTGTCT GCACCATTGC CGGCATTGTT CTCTTCGGGA TACACCCACG GAAATATATG AGGCAGGCAG GAATCCGCCT TATCATATAC GAATCAGAAG AGAAGACCTA CCAGACATTC GTTGATACCG TACTTGACGG GCCATGTACC GGACGATATA TCACAAATGA ACACGGAGTC AGAACACTCC AGGACCCAGG TCTCATTGAA CGGTTCAGCG AGATGATTAT GCCATTTATC TCAACCGGTG CGAGCACAGT CAATGATGAG TTCAGACTGA CAAAAGACTG GCAATACCCC TTTGAAGCAA TTCGTGAAGT GGTCATCAAC GCCCTCTGCC ACCGGGACTG GACACGGGCA GTTGATGTCG AAGTAAGCAG ATATAGTGAC AGGATTGAGA TCATCAGCCC TGGTGCTCTT CCAAATTCCA TGACCGTAGA GAAGATGATT GCAGGGCAGC GGTCTCCACG AAATCCATTG ATAGTGGAAA TATTACGTGA CTATGGGTAT GTTGAGAGTA GGGGGATGGG TGTCAGAACC AAGGTGATTC CGCTGATGAA GATGAATAAT AACAGAGAGC CGGTCTTTAA GGCAACTGAG GATTATCTGT GTACAGTCTT ATACCGGAAA TCAGAATAA
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Protein sequence | MLTKDLLEII SHGENSGVEF KRDDVRPEQL AKEIVALANH RGGMILLGVE DDGTISGVQR DNLETWIFDT VFGRYVHPMI LPFYETVRIE PGKQVAVISF PEGTSKPYVL RNNDREEIYI RAGSTSRLAT REQQARLFAA GGILHTELLP VPGTSFQSLD LTRIREYLTH IIHDPEIPDK DEDWIRRLTG LGMLTTVSGD RVVCTIAGIV LFGIHPRKYM RQAGIRLIIY ESEEKTYQTF VDTVLDGPCT GRYITNEHGV RTLQDPGLIE RFSEMIMPFI STGASTVNDE FRLTKDWQYP FEAIREVVIN ALCHRDWTRA VDVEVSRYSD RIEIISPGAL PNSMTVEKMI AGQRSPRNPL IVEILRDYGY VESRGMGVRT KVIPLMKMNN NREPVFKATE DYLCTVLYRK SE
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