Gene Mhun_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3234 
Symbol 
ID3922127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3536893 
End bp3538788 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content47% 
IMG OID637898849 
Productserine phosphatase 
Protein accessionYP_504635 
Protein GI88604457 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAT CCATCCGGCA ATACCTCATT TTTTACATCA TTCTCATTAT TGCCCTCGTT 
CTTGCCGGAG TATTACCGAT CAGTTATATC AGGGCAACTG AGGATGTCAT CAGGGAACAT
GCCATAATAG AGGCATATAC TGAGCATACG TTGATCGAAT CGGTTCAGCT GGTAAATAAG
GGACTGGATC TGATTGACAG TTCTTTAAAT CCGGTTATGG AAGAGATGCT CTCTACCTAT
CTTGAAGAGT ATACGAGAAG CGGTCAGGAT CCTGGGGCGA TGGATCTTTT CTCGCTGAAA
GAACGGTTCA GTCAGCAGAC AAATGCAACG GTTGATCTCT ATGTGTTTAA TGAGGACGGG
ATCATTTTGT ATACGACAGA GCCTGCAGTA AAGGGGGTAG ACTTCAAAAA TTACCCTGAA
TTTTATAGTG CACTCAAACA GCACATGAAA GGCAGCACCC CGGCCATGGA TCGGGTGGTC
AGATCTGTTC AGAATCAGAG TGATCTCAAG GTCCTTGGAG ATCTCAGGAA GTTTGCATAC
ATCCCGACTC CTGATCACCG GTATGTTCTT GAGATTGGTC TTTTATCTGA TGCTTTTGCA
GATATCAGGT CTGAATTCTC GTACCAGTAT ATGGTCGGAC GGATATGGGA TGAAAACCCG
GATATTGATG TTCTTGAGAT CTATGATATC TGGGGAAACC GGGTCGCGGT CTGGAGTTCA
GATCAGAATA TCTCTGAAGA GGTAATCCCC CTCCCCTCCG ATGATATCAC ACAAGCTCTC
AGGTCACGAT CAGGTACATC ATTTGGCTCC CCGGTACAGG GGGATCGCAC CACCATTTTA
TTCATCGATC TGAAAAACCC ACAGGCACTG TCTGATGATA GTATCGTCGC GGTGATCAGG
TACGGAGACC GGCTGAAAGA ACAGCTTGAG ATGCTGCTGT TTCAGTATAT CCTGTTTGGA
ATTGTAGGGA TCGGTTCAGG TATAATTCTG GCACTTTTGG TATCTAAGCG TATTTCAGCT
CCGATTCGGG AGATTGTTAC CGACGTGCAC CAGATAGCAG ACGGGGACCT GGATCATACA
ATCAGAAGCA TGCACACCCT TGAATTTACC GAACTTGAGA CCAGCATGAA CCTGATGATC
CAAAAGATCA AGGAGTACAG TGAGGAGATT GAACGAAAAC GTTCAGAGAT GCTTGTTGCA
TCGAAGATCC AGCAATCGAT CATCCCTGCA TCATTTCCGG TTCCGGAAGG CTTTGATATT
GCTGCGATAA CCATTCCGGC TCTTGAAGTC GGTGGGGATT TTTATGATAT CTTTTCAAGG
CATGATACCT CAGTCACCCT TGTGCTTGCT GATGTTGCAG GAAAAGGGGT GCCCGCTGCT
CTCTTCATGG CACTCTCCCG GACCATCATC AGGATACTCA CCCGCTGGCC CGGCTCCCCG
GCAGGTATAA TCCGGTCATC AAACTCCATC TTTATCGAGG ACTCCGGTTC AGTGAGTTTT
GTAACCCTGT TTTTCGGAGT CCTTGATGCT CAATCATGTA TACTCCGGTA TGTCAATGCA
GGACATAACC CTCCTGTCCT GTACAGGGCT GAGAGGAACC TTTCAACTCT GGAACCAACC
GGTCCGGTGA TCGGTCTTTT GGACGATCCT GATTATTCTG AGGGTTCAGT CACACTCTCA
CCCGGTGATG TGCTTGTCAT CTATTCAGAC GGGGTGACTG AAGCGATGGA TCCTGATGGG
AAGTTATTCA CTGAAGAACG GCTGTACGAA GTGATACAGC AGCACCATCT CTCTTCTGCA
GAAGGACTGA TGCAGGCAAT CGTTCTGGCG GTTCGGACAT TTGCTGGTAC AGCACCCCAG
TCTGATGATC TAACGCTCAT TGTTGTGAAG AGATGA
 
Protein sequence
MIVSIRQYLI FYIILIIALV LAGVLPISYI RATEDVIREH AIIEAYTEHT LIESVQLVNK 
GLDLIDSSLN PVMEEMLSTY LEEYTRSGQD PGAMDLFSLK ERFSQQTNAT VDLYVFNEDG
IILYTTEPAV KGVDFKNYPE FYSALKQHMK GSTPAMDRVV RSVQNQSDLK VLGDLRKFAY
IPTPDHRYVL EIGLLSDAFA DIRSEFSYQY MVGRIWDENP DIDVLEIYDI WGNRVAVWSS
DQNISEEVIP LPSDDITQAL RSRSGTSFGS PVQGDRTTIL FIDLKNPQAL SDDSIVAVIR
YGDRLKEQLE MLLFQYILFG IVGIGSGIIL ALLVSKRISA PIREIVTDVH QIADGDLDHT
IRSMHTLEFT ELETSMNLMI QKIKEYSEEI ERKRSEMLVA SKIQQSIIPA SFPVPEGFDI
AAITIPALEV GGDFYDIFSR HDTSVTLVLA DVAGKGVPAA LFMALSRTII RILTRWPGSP
AGIIRSSNSI FIEDSGSVSF VTLFFGVLDA QSCILRYVNA GHNPPVLYRA ERNLSTLEPT
GPVIGLLDDP DYSEGSVTLS PGDVLVIYSD GVTEAMDPDG KLFTEERLYE VIQQHHLSSA
EGLMQAIVLA VRTFAGTAPQ SDDLTLIVVK R