Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3234 |
Symbol | |
ID | 3922127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3536893 |
End bp | 3538788 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637898849 |
Product | serine phosphatase |
Protein accession | YP_504635 |
Protein GI | 88604457 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTAT CCATCCGGCA ATACCTCATT TTTTACATCA TTCTCATTAT TGCCCTCGTT CTTGCCGGAG TATTACCGAT CAGTTATATC AGGGCAACTG AGGATGTCAT CAGGGAACAT GCCATAATAG AGGCATATAC TGAGCATACG TTGATCGAAT CGGTTCAGCT GGTAAATAAG GGACTGGATC TGATTGACAG TTCTTTAAAT CCGGTTATGG AAGAGATGCT CTCTACCTAT CTTGAAGAGT ATACGAGAAG CGGTCAGGAT CCTGGGGCGA TGGATCTTTT CTCGCTGAAA GAACGGTTCA GTCAGCAGAC AAATGCAACG GTTGATCTCT ATGTGTTTAA TGAGGACGGG ATCATTTTGT ATACGACAGA GCCTGCAGTA AAGGGGGTAG ACTTCAAAAA TTACCCTGAA TTTTATAGTG CACTCAAACA GCACATGAAA GGCAGCACCC CGGCCATGGA TCGGGTGGTC AGATCTGTTC AGAATCAGAG TGATCTCAAG GTCCTTGGAG ATCTCAGGAA GTTTGCATAC ATCCCGACTC CTGATCACCG GTATGTTCTT GAGATTGGTC TTTTATCTGA TGCTTTTGCA GATATCAGGT CTGAATTCTC GTACCAGTAT ATGGTCGGAC GGATATGGGA TGAAAACCCG GATATTGATG TTCTTGAGAT CTATGATATC TGGGGAAACC GGGTCGCGGT CTGGAGTTCA GATCAGAATA TCTCTGAAGA GGTAATCCCC CTCCCCTCCG ATGATATCAC ACAAGCTCTC AGGTCACGAT CAGGTACATC ATTTGGCTCC CCGGTACAGG GGGATCGCAC CACCATTTTA TTCATCGATC TGAAAAACCC ACAGGCACTG TCTGATGATA GTATCGTCGC GGTGATCAGG TACGGAGACC GGCTGAAAGA ACAGCTTGAG ATGCTGCTGT TTCAGTATAT CCTGTTTGGA ATTGTAGGGA TCGGTTCAGG TATAATTCTG GCACTTTTGG TATCTAAGCG TATTTCAGCT CCGATTCGGG AGATTGTTAC CGACGTGCAC CAGATAGCAG ACGGGGACCT GGATCATACA ATCAGAAGCA TGCACACCCT TGAATTTACC GAACTTGAGA CCAGCATGAA CCTGATGATC CAAAAGATCA AGGAGTACAG TGAGGAGATT GAACGAAAAC GTTCAGAGAT GCTTGTTGCA TCGAAGATCC AGCAATCGAT CATCCCTGCA TCATTTCCGG TTCCGGAAGG CTTTGATATT GCTGCGATAA CCATTCCGGC TCTTGAAGTC GGTGGGGATT TTTATGATAT CTTTTCAAGG CATGATACCT CAGTCACCCT TGTGCTTGCT GATGTTGCAG GAAAAGGGGT GCCCGCTGCT CTCTTCATGG CACTCTCCCG GACCATCATC AGGATACTCA CCCGCTGGCC CGGCTCCCCG GCAGGTATAA TCCGGTCATC AAACTCCATC TTTATCGAGG ACTCCGGTTC AGTGAGTTTT GTAACCCTGT TTTTCGGAGT CCTTGATGCT CAATCATGTA TACTCCGGTA TGTCAATGCA GGACATAACC CTCCTGTCCT GTACAGGGCT GAGAGGAACC TTTCAACTCT GGAACCAACC GGTCCGGTGA TCGGTCTTTT GGACGATCCT GATTATTCTG AGGGTTCAGT CACACTCTCA CCCGGTGATG TGCTTGTCAT CTATTCAGAC GGGGTGACTG AAGCGATGGA TCCTGATGGG AAGTTATTCA CTGAAGAACG GCTGTACGAA GTGATACAGC AGCACCATCT CTCTTCTGCA GAAGGACTGA TGCAGGCAAT CGTTCTGGCG GTTCGGACAT TTGCTGGTAC AGCACCCCAG TCTGATGATC TAACGCTCAT TGTTGTGAAG AGATGA
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Protein sequence | MIVSIRQYLI FYIILIIALV LAGVLPISYI RATEDVIREH AIIEAYTEHT LIESVQLVNK GLDLIDSSLN PVMEEMLSTY LEEYTRSGQD PGAMDLFSLK ERFSQQTNAT VDLYVFNEDG IILYTTEPAV KGVDFKNYPE FYSALKQHMK GSTPAMDRVV RSVQNQSDLK VLGDLRKFAY IPTPDHRYVL EIGLLSDAFA DIRSEFSYQY MVGRIWDENP DIDVLEIYDI WGNRVAVWSS DQNISEEVIP LPSDDITQAL RSRSGTSFGS PVQGDRTTIL FIDLKNPQAL SDDSIVAVIR YGDRLKEQLE MLLFQYILFG IVGIGSGIIL ALLVSKRISA PIREIVTDVH QIADGDLDHT IRSMHTLEFT ELETSMNLMI QKIKEYSEEI ERKRSEMLVA SKIQQSIIPA SFPVPEGFDI AAITIPALEV GGDFYDIFSR HDTSVTLVLA DVAGKGVPAA LFMALSRTII RILTRWPGSP AGIIRSSNSI FIEDSGSVSF VTLFFGVLDA QSCILRYVNA GHNPPVLYRA ERNLSTLEPT GPVIGLLDDP DYSEGSVTLS PGDVLVIYSD GVTEAMDPDG KLFTEERLYE VIQQHHLSSA EGLMQAIVLA VRTFAGTAPQ SDDLTLIVVK R
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