Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3170 |
Symbol | |
ID | 3924715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3465596 |
End bp | 3467425 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637898775 |
Product | type II secretion system protein E |
Protein accession | YP_504571 |
Protein GI | 88604393 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCA GGGTGGGGAG TTTAAAAAAA GAGAAAAATG GTGTCAAGGG GAAGGATACG GGAGCTGGAG ATCCAGCTGC GGCAAAACCT GCCCCTCCGA CAAAACCCTT GAAATTATCC GCGCTCGGTG GAAAAAAGAA AGAGGCTGCT GAAAAACCGT CCGGGCTTCG TCGTCTTGGG AAAAAGGATG TACAAGTGCC GCAAGTTCCT GAATCCGTTT CCTCTGAACC GAAAAAGAAG TCCCTGTTCA GTTCATTTAG TAAGATAGCT CCACTTGCAA AGAAGCGTGA GCAGTATGAT CCCAAGGTTC ATGGGATGAT GGTCAACCTC ACCTTTGAAC CGCCGCCGGG GACCGAGGAG ATTGAGGTAT ATCCGGTCAA TCCCCCATTT GCATACATCC GTATCACCTA CAATTATATC ACGCACGAAT ACCTCTACGA GGTTGTTGAG CCCATCTATA CCGATGCAGA AAAAAAACTC CTTGACGAGA TTAAAAAAGG GATCTTTGAG CGGGTGAATG TGAACACCCG GCAGATCTCC AGGGAGACTG CGGCAGAGAC CCTTGAGTCT ATGATGAATG AGGTTCTTGC CGATTATGCC ATCTCTCTGG ATCCCCTGAC CTATGAGAAG ATCCACTACC ATCTGAAAAA GGATTTTCTT GGTGACGGTC TTGTCGATCC GGTGATGCAT GACCGGTATA TCGAAGATAT CTCCTGTGAC GGTGTGGGAA GGCCGCTTTT TGTTTATCAC TCCAGATATG AATCTATAGA ATCAAACCTT TTTTACACCG ATGCTGCTGA ACTTGATTCA TTTGTAACCA AACTGGCCCA GAGGGCAGGA AAGCACATAT CAGTTGCAGA TCCCATGCTC GATGCCACTA TGCAGGATGG CTCCCGTATC CAGATGACAC TCGGCTCTGA GGTGACTGCT CATGGCTCTA CCTTTACCAT ACGTAAGTTC AAGGATGAAC CCATCACCCC GACCGACCTG ATTGAGTGGG GTACATTCTC ACCTCTCTCT ATTGCATTTC TCTGGCTTGC GGTCGAGAAC GGAAAGTCAT GTATCTTTGC CGGGGGGACG GCATCAGGAA AGACCACCTC ATTGAACGCA ATATCCCTCT TTATCCCGCC GCTTGCAAAG ATCGTCACCC TAGAAGATAC TCGTGAACTG AAACTGCCTC ATTCCAACTG GATCCCGAGT GTCACTCGTG AGTCCTTTGA TGTGAGTGGG AAAGGGGAGA TTGATATGTA TGAGCTCCTG AAGGCTGCGC TTCGTCAGCG TCCGGAGTAT CTGATTGTGG GTGAGGTCCG TGGCCGTGAA GCGCTCACCC TCTTTCAGGC GATGTCAACC GGCCACGTCA CTTACTCGAC CATGCACGCG GATTCGGTAT CCTCAGCAGT CCATCGTCTT GAAAACCCGC CCATCTCTGT GCCCAGGAAC ATGCTTTCAG CGCTGAACCT GGTGTGTGTT CAGATACAGG CACGGGTAGG TGGTCAGCGC ATCAGGAGGA ACAAACAGAT CATCGAGGTT CTTGACATCG ATCCCAGGAC AAATGAACTG ATCACGAATG AGGTGTTCAG GTGGCGGCAG GCAACCGATG AGATCTCCTA CTCAGGAAAG TCATTCATTC TTGAAGAGAT TATGGAGGCA CACGGGTGGG ATGAGGAACG GATCAGGCGT GACCTGCTCC AGCGACAGGA GGTCCTTGAA TGGATGCGTG AGAAGAAGAT CCGTGACTTC CGTGATGTGA GCAAGATTGT CGTCTCGTAC TTCAGGGATG CCGAAACCCT GATGGAGCAG ATACGGTCTG GTGGCAATGA ATTCATATGA
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Protein sequence | MKVRVGSLKK EKNGVKGKDT GAGDPAAAKP APPTKPLKLS ALGGKKKEAA EKPSGLRRLG KKDVQVPQVP ESVSSEPKKK SLFSSFSKIA PLAKKREQYD PKVHGMMVNL TFEPPPGTEE IEVYPVNPPF AYIRITYNYI THEYLYEVVE PIYTDAEKKL LDEIKKGIFE RVNVNTRQIS RETAAETLES MMNEVLADYA ISLDPLTYEK IHYHLKKDFL GDGLVDPVMH DRYIEDISCD GVGRPLFVYH SRYESIESNL FYTDAAELDS FVTKLAQRAG KHISVADPML DATMQDGSRI QMTLGSEVTA HGSTFTIRKF KDEPITPTDL IEWGTFSPLS IAFLWLAVEN GKSCIFAGGT ASGKTTSLNA ISLFIPPLAK IVTLEDTREL KLPHSNWIPS VTRESFDVSG KGEIDMYELL KAALRQRPEY LIVGEVRGRE ALTLFQAMST GHVTYSTMHA DSVSSAVHRL ENPPISVPRN MLSALNLVCV QIQARVGGQR IRRNKQIIEV LDIDPRTNEL ITNEVFRWRQ ATDEISYSGK SFILEEIMEA HGWDEERIRR DLLQRQEVLE WMREKKIRDF RDVSKIVVSY FRDAETLMEQ IRSGGNEFI
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