Gene Mhun_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3147 
Symbol 
ID3924027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3437099 
End bp3438526 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content31% 
IMG OID637898754 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_504550 
Protein GI88604372 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.875944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.24442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTCC CCCTAGTTAT TCGGAATATT TCTAGCATAA CTTTATCTCA ATTAATAATT 
GTTTTATCAG GAATAATTTT AATCTCCCAT CTTGGAACAA CATTAGGCCC GAAAAACTTC
GGAATTTATA GTTCGGCTAT TTCCATTTAT GGAGTCTCTA TTGCCATTGT TGATCTTGGA
CTATCTATGT ATGGGATTCG ATATATCGCC TCAAAAAAAG CTGCCACCTT AAATTTAATA
AAAAAAATTA CCCGAATTAA AATTTTTCTG GCAATATTGG TAATTGCATT TTCAGGGATT
ATCTTCCTAT ACATAAATCC CGAGAGTATT TTTGTCGCGA TTTGCTGGTT ATTTTTTACA
TCTCTCATTC CTTACGCTTT TAATCTCGAA TGGGTTTTTA CCGGTCTGGA AAAAATGGAA
ATACGGGCAT TTTTACGAAC CATAACATCA ATAGGGGTAT TGTTATTATG CATTTTTTTT
ATTCACTTTC AAAACGATAT TATTTGGGTA CCAATTATTT ATTTCATCAT TGCAAGCATA
GTTGCAATAG TATCATTGAT ATTGACACAT CTTTTGAGTG AAAAACCATT TTTTGAAACA
GGAGTACTTT TAGAGGATAA AACCCTTATA ATTTCCAGTT TCCCCATAGG ATTAACCCAA
ATATTGTCTC TTTTTTTGAT TAATGCAGAT CTTATTGTAT TAGCCTTTTT TATTTCTCCG
GAAAATTTGG GAGAATATGC AGCTGTATCT AGGATTTTAT CGACATTAAT ATCAATTATA
GGAATGATTT TCATCCCATT ATTTCCCGCT TTCTGTAGAA AAAGTAGAGA TTATCGAATT
GATCACGAGA ATATACTTGA GTTTGTAATT GTTTTTATTT TTGCCCTATC AATTCCCATT
ATCTGTTGTG TAGAATTATT TACTCCTTCT TTAATAAGCA TTTTATACAG TTCACACTAT
TTTAGGAGTA TCATGATAAT GCAAATATTA ATATGGTATG TACCAATTGC AATAATGATT
ACAATTCTGT CATGGTTTGT ATTATCAAAA AACGAGGACA ACTCATATCT ACAGTTTGTA
ATATTTATGA TAACCCAATT GGTAATTTTC ATGATTATCG GGACGAATTT GTGTGGAATA
AAGGGCACCG CATTTTCGGT AGTGATTTCA TATGTAATTT CAATTTTTAT CTTACTAGAG
TGGGTCAAAA ATCATCTTGG ATCTAACTTA AAGAGAATCA TACAATTCAT TACAGTTTTT
ATATGTCTCG GGTTCTGTTG CACGACGATT AGTATCAATT TAGAGACTTC AATGGTATAT
GTAGTTATAA GCGTGATTTT TATATATTCA ATTTTTATTT TAAAATATTC CTTAATAAGG
TTCAACGACA TTAGAACCCA CATTCGCCAG ATCTTTTTTC AACAATAG
 
Protein sequence
MKFPLVIRNI SSITLSQLII VLSGIILISH LGTTLGPKNF GIYSSAISIY GVSIAIVDLG 
LSMYGIRYIA SKKAATLNLI KKITRIKIFL AILVIAFSGI IFLYINPESI FVAICWLFFT
SLIPYAFNLE WVFTGLEKME IRAFLRTITS IGVLLLCIFF IHFQNDIIWV PIIYFIIASI
VAIVSLILTH LLSEKPFFET GVLLEDKTLI ISSFPIGLTQ ILSLFLINAD LIVLAFFISP
ENLGEYAAVS RILSTLISII GMIFIPLFPA FCRKSRDYRI DHENILEFVI VFIFALSIPI
ICCVELFTPS LISILYSSHY FRSIMIMQIL IWYVPIAIMI TILSWFVLSK NEDNSYLQFV
IFMITQLVIF MIIGTNLCGI KGTAFSVVIS YVISIFILLE WVKNHLGSNL KRIIQFITVF
ICLGFCCTTI SINLETSMVY VVISVIFIYS IFILKYSLIR FNDIRTHIRQ IFFQQ