| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3140 |
|---|
| Symbol | |
|---|
| ID | 3924020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3428590 |
|---|
| End bp | 3429102 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637898748 |
|---|
| Product | flagellin |
|---|
| Protein accession | YP_504544 |
|---|
| Protein GI | 88604366 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1681] Archaeal flagellins |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000925657 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0146559 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG AAACAGCATT TTCCGGCCTT GAAGCAGCGA TTGTGCTTAT TGCATTCGTT
GTAGTCGCCG CAGTGTTCTC CTATGTGATG CTGGGTGCAG GGTTCTTCGC AACTCAGAAG
TCACAAGAAG TAACCTACTC AGGAATGAAA CAGGCAACAT CAAACCTGAT ACTTGATGGT
ATGATCTACG GGTCATATTC TAAAGGTGGC AGTGGGTTAG CGCAACTTTA TTTCTATGTG
AAGGTTCCCG AAGGCGGAGA GACTCAGGAT CTTAAATATG TCACCTATCT CTGGACTAAG
GAGAACAAAG CCGTTACAAC CTTGACGAGT ATAACTCCAA CTAATCAACA ATTAAACCCT
GGTGCTCGTG TTAAGGTAAC AATTACTGCA CCAACAGGAT ACAAACCAAT TGCAGGACAG
AAATTTGTTC TGGAAATTAA ACCGAAGACT GGAGCATCAA CGATTGTAAC AAGAACTTTA
AGCGATGGAT ATAATGGCGG AGTTATTATC TAA
|
|---|
| Protein sequence | MRKETAFSGL EAAIVLIAFV VVAAVFSYVM LGAGFFATQK SQEVTYSGMK QATSNLILDG
MIYGSYSKGG SGLAQLYFYV KVPEGGETQD LKYVTYLWTK ENKAVTTLTS ITPTNQQLNP
GARVKVTITA PTGYKPIAGQ KFVLEIKPKT GASTIVTRTL SDGYNGGVII
|
|---|
| |