Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3134 |
Symbol | |
ID | 3923962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3419191 |
End bp | 3420924 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637898742 |
Product | transposase, IS4 |
Protein accession | YP_504538 |
Protein GI | 88604360 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00132337 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGCTC CGACACATCA AATTGAACAC ATCGGCGGAA TCCCATATAT CTTTGAAACA TTAAAAGAAC TTCAAATCAT ACGAATTTTG AATGAGGTAT ATTCGCCTCA CAGAAACTGG GTGGGTTTGC CGATTGGTGA AACGATTGCC ATTTGGATCT GCTACTGCCT GACCGAAAAT GATCATCGTA TGTGTCCCTT GGAGAAGTGG GTTACTACCA AAAAAAATTT ACTGGAAAAA TTGATTGGTT TTCAATTTAG TCCAAAATGC TTTACTGATG ACCATTTGGC TCGTATATTA TCTCTATTGC ACAATAATGA ACTTTGGAAC CGATTTGAAT CTGAATTAAA TCGTTCTACA CTGCGTATAT ATGGTTTAAC GGATGAAAAC ATCGTCCGTC TTGATATGAC AACAGTAAAC AGCAATGGAA TTATCGATAA AAACGGATTA ATACAATTTG GCAACTCAAA AGATGACGCC TCCCTCCCTC AAATAAAAAT CGTACTTTCA GTGCTTGATG TGCTGGGTTT GCCCCTCACC GTTAGTGTAG TCCCTGGAAA TTGTGCTGAT GATCCTCTCT ATATCCCTGC AATGGAAAAG GTGAAAAAAT CTACGGGACA ATCTGGATTA CTTTTTGTGG GAGATTGCAA AATGGGTGCC ATAGCAACTC GTTTGTATAC GACTATCAAT AATGACTTTT ATTTATGCCC GTTATCAGAA GTCTCTCATC CTACTCAGGA AATTTATTCT GCAATCATAG CACATCAGGA GTCTAATCTT TCCTTCACAC AAGTTTCACG ATCGTACTAT GATGGAAGCG ATGCGATTAT AGCCGAAGGA TTTGAGAAAA AAATATCTCA TTCAATGGAA TATGAGGGGA AAATCATAAC CTGGGAGGAA CGGCTAATCT ACGCAAAATC ATTTGCTCAT GCAAATAAAT TCAGATTATC ACTTGAAGAG CAAGTAAAAA AAGCTTTCTT TGAGATAAAT TCAATGAATA AAAGAGGAAA GGGAAAGAAA ATTTACCGAA CAATCGAGGA AGCAAAAGAA AAAGTACATG CTATTCTTGG AGATAAGGGA TTAACAGCGG TATTCGAAGT TGAGTATATC GAGCATATTA GTAATACTCC AAAACGAAAA TACGGAAACA ATCCCGCCAG AATTGAACAA TCGACGAGAA TTGAGGTTAA ACCAACTATT AACTTGCAAG CCCTTCAACA AGCGCAGGAA TTATCAGGAT GGAGGGTATA TGTAACAAAT AAACCAGAAA ATGAATTATC GATGCAAGAT GTTGTTCTGA CTTACCGTGA TCAGTATATC ATAGAGCATC AATTTCATCG GCTGAAGGGA AAGGCACTTT CACTTGCCCC AATGTTTATT CAACGAGATG ACAGAATTGA TGGTTTAGTG AAGTTTTTGA CTATTGTAAT GAGACCACTT GTTATTATTG AGAAAAAAGT CAGGGATTCG CTGAAAAGTA GAGGTCAGGG TTTGAGTGGT CTTTTCGAAT ATAATCCAAC GAAAATAGTA AATAATCCTA AAACTGAAAG AATTATTGAG TTTTTCAAAG AGATTTATTT GTTAGTTTCA TTTTATGGTG AACAGGTTTT TTACACAATT ACTGGGATAA ATCAAAAGCA TCGAGAGATT TTAAATCTGA TGAATGTTGA TATTAGTGTT TATACTCAAT TGGGATCAAT TCAGGAATCT GAATTTAAGA TCAGCGAACG GTGA
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Protein sequence | MIAPTHQIEH IGGIPYIFET LKELQIIRIL NEVYSPHRNW VGLPIGETIA IWICYCLTEN DHRMCPLEKW VTTKKNLLEK LIGFQFSPKC FTDDHLARIL SLLHNNELWN RFESELNRST LRIYGLTDEN IVRLDMTTVN SNGIIDKNGL IQFGNSKDDA SLPQIKIVLS VLDVLGLPLT VSVVPGNCAD DPLYIPAMEK VKKSTGQSGL LFVGDCKMGA IATRLYTTIN NDFYLCPLSE VSHPTQEIYS AIIAHQESNL SFTQVSRSYY DGSDAIIAEG FEKKISHSME YEGKIITWEE RLIYAKSFAH ANKFRLSLEE QVKKAFFEIN SMNKRGKGKK IYRTIEEAKE KVHAILGDKG LTAVFEVEYI EHISNTPKRK YGNNPARIEQ STRIEVKPTI NLQALQQAQE LSGWRVYVTN KPENELSMQD VVLTYRDQYI IEHQFHRLKG KALSLAPMFI QRDDRIDGLV KFLTIVMRPL VIIEKKVRDS LKSRGQGLSG LFEYNPTKIV NNPKTERIIE FFKEIYLLVS FYGEQVFYTI TGINQKHREI LNLMNVDISV YTQLGSIQES EFKISER
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