Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3127 |
Symbol | |
ID | 3923955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3406735 |
End bp | 3407421 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637898736 |
Product | hypothetical protein |
Protein accession | YP_504532 |
Protein GI | 88604354 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.211468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000170391 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGGTTCCAT CCTCAAAGAC AAATTCATCT CCACCAGCTG ACACTGAATC TATCAACAGC CCCCTTTCAT TCGAAAAAGT ATGGCTTATG TTTCAGGAAA CGGATAAAAG ATTCAAAGAG ACGGATAAAA TACTGACGGA AAAATTTCAG GAGACTGACA GATTATTAAC AGAAAAGTTT CAGGAAACTG ACAGAATATT AACAGAAAAG TTCCAGGAAA CGGATAATAA ATTTAAAGAG ACAGATAAAA AACTCAACAA ACTCGAGCAA TTATTCACCT CACAATGGGG CAAACTTGTG GAGTCCCTGG TAGAAGGAGA CGTAATTAAA ATTCTGAATG AACGAGGGAT AGAAGTTACT GATACCCTGA GGCGACGAAC GGGACGACGT GATGGAATAG ACTACGAATT TGATATTATC GCAATAAATG GGACAGATAT CGTAATCATT GAGGTAAAGA CAACCTTAAG ACCAGGAGAT GTTCGTGATT TTTTGAAAAA ACTGAAGCAG GCAAAAAACT GGATGCCGGA ATATTCAGAT AAAAATATTT ACGGGGCGAT GGCATTCATA TCCGAAGATG CAGGCACAGC AGCAATGGCA GAGAAAAAGG GACTTTTTGT CATACGAGCA ACGGGAGATA GTGCAAGTAT CATCAACCAG GAAAACTTTC AGCCGAAGAT ATGGTAA
|
Protein sequence | MVPSSKTNSS PPADTESINS PLSFEKVWLM FQETDKRFKE TDKILTEKFQ ETDRLLTEKF QETDRILTEK FQETDNKFKE TDKKLNKLEQ LFTSQWGKLV ESLVEGDVIK ILNERGIEVT DTLRRRTGRR DGIDYEFDII AINGTDIVII EVKTTLRPGD VRDFLKKLKQ AKNWMPEYSD KNIYGAMAFI SEDAGTAAMA EKKGLFVIRA TGDSASIINQ ENFQPKIW
|
| |