Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3126 |
Symbol | |
ID | 3923954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3402208 |
End bp | 3405696 |
Gene Length | 3489 bp |
Protein Length | 1162 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637898735 |
Product | PKD |
Protein accession | YP_504531 |
Protein GI | 88604353 |
COG category | [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0241283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000395166 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGATCAA ACGCGCTTCG TCAAACCCGA TCATATACTT CCGGGATAGG GTATACTGTT CTGTTGTTAA TTATTACCGT CGCTCTTCTT CTGGTTTCCT GTAGTGGAAT TGCCGGGGCC GAGTCTGTCC GTCCCCCGAT AGTGGTCCCA TCAGTGAGTG GGCCTGTTGT TGCTCCGCCT GGTCCGACGG GTGTGGTGCA TTCGGATGGT ACGTCTGTAC TTTCCGAGAC GCCGGTCAAT ATGAGTGAAA TAAATCTTGA GTCGTTAGGT TATGTGAGTA GCACGGTGAC CGTGGTTTCA GGTCCTCCAG CGTTTTTGAG TGGATGGAGT TATCGAAAGA TTCATGCGAT TGGTGGGAGT CCGGATGGGG ATTTGACGAA TTATCAGATG CGGTTTGTAG TCTGGCGAAC GACCGGGACT GATTCCGGGG AGAATGTGTA TGTTGGAACC AATGTCCGGG AAGATTATGG CGATCTCCGG TTTACTACGG TTGCTGGTGC CCAGATACCC TACTGGATTG AGTCGGTAAA TGCGACCGCT GCGGTTGTGT GGGTGAAGGT TCCGAGTATT CCAAGGGCTG GGACGCAGAT TGTGATGTAT TATGGGAATC GGAGTGCAGT GAGTGAGAGC TCGGGGAGTG CTGTTTTTAA TGTCTTTGAG GATTTTGAAG AGAGTGTGTT AAACGGTTGG ACTCTGGATT CCGGTGTAAC CGTCAGTCAG GTAACTGAGG GTTCAAACAA GGTTGGGCGG TTTACTTCAA ACGGTGTTGC CGGTAGCGGA GCGTATAAAT CCTGGACTGC TGGTTCCGGA ATTATTGAAT ATTCCATCAA ACCTGCCCAG ACCACTGCGT ATCATACTGT TTCAGCGTTT TCCGGCCATG CCTCCGGGGT AAAAGGTGCG TGGTTCTTTG CTGCAAATAT TGGTAAATTC GGCTCTGCAA CTCCTTCCTG GGCATATTTC ACCAGTTATG TTGCAAATCA GTGGTATACT GTCCGGCTTG ATCTAAAGGG GAACGGATAT TATGATGCTT ATGTCAATGG AGTGAAAATT GGGGCCGATT GGGCATATTA TGGTGCAACC ACTACTGACC GTCTAGGTCT TGTCGGGTGG ACAACCGGAG GTCAGGCATA CTATGATAAC ATCCGTGTCA GAAAGTTTAC AAATACCAGA CCTGTTCATG GAGGATGGTT AAGTGGAGTT ACAACTGAAC AATTGGCGGC CGATTTTAGT TTCACTCCGA CAAGCGGTCA GTATCCACTC AATGTCACCT TCACCGATCT GTCCACTGGA CCTATCACTT CTCGTAGCTG GGACTTTGGT GACAGTGGTA GTTCTACCGA ACAAAACCCG TCTCACACGT TCACCGGTGC GAATACCTAC TCTGTCACCC TCACGGTCAG TTCTACCTAT GGACAATCAC CCAGTTCAAT CACAAAAACG ATTGTAGTCT CTGCTCCTCC CAGTTTCCCT GCTGACTGGC AGAATCAAAA GATCTTTATC GTCTCATCTG GAACAGGCTC AACAGTTACC AACACTCCAT TCAAACTCAC CCTTTACCGG ACAAGCGGGA CAGATAGTGG GAATACTGTG TACCTTGGTA GTTCAGTTCG TTCAGACTTT GGTGATATCC GGTTTACTGA TTCCGGAGGT TCACAAATTC CATATTGGAT AGAATCCGTC AGTGATGGAG TTGCAGTTGT CTGGATAAAA CCCTCAAGTA TCAGCAGTAC CGGAACTCAA TTCAGTATAT ATTATAACTG TGCTGGAGCA ACAAGTCAGT CTGATGGAAG TTCTATCTTC TCCGTCTTTG AAGACTTCGA AGAGAGTGTT TTATCCAGCT GGACTCTGGA CTCCGGTGTT ACGATGAGTC AGGTAACTGA GGGTTCAAAC AAGGTTGGGC GGTTTACTTC AAACGGTGTT GCCGGTAGCG GAGCGTATAA ATCCTGGACT GCTGGTTCTG GAATTATTGA ATATTCCATC AAACCTGCCC AGACCACTGC GTATCATACT GTTTCAGCGT TTTCCGGTCA TGCCTCTGGA ATCAAAGGTG CATGGTTCTA TGCTGCAAAT AATGGTAAAT TCGGTTCTGC AACTCCTTCC TGGGCATATT TCACCAGTTA TACTGCAAAT CAGTGGTATA CTGTCCGGCT TGATCTAAAG GGGAACGGAT ATTATGATGC ATATGTCAAT GGAGTGAAAA TCGGCACTGA TTGGGCGTAT TATGGTACAA CAACCACTGA CCGACTAGGT CTGGTTGGCT GGACAACCGG AGGTCAGGCA TTCTATGATA ACATCCGCGT CAGGCCTTAT GTTTCAACTG AACCGGGAAT CGAATGGATA GATCCCAGCA CTCCTCTCAT GGCCGATTTT AGTTTCACTC CGACAAGCGG TCAGTATCCA CTCAATGTCA CCTTCACCGA TCTGTCCACT GGACCTATCA CTTCTCGTAG CTGGGACTTT GGTGACAGTG GTAGTTCTAC CGAACAAAAC CCGTCTCACA CGTTCACCGG TGCGAATACC TACTCTGTCA CCCTCACGGT CAGTTCTACC TATGGACAAT CACCCAGTTC AATCACAAAA ACGATTGTAG TCTCTGCTCC TCCCAGTTTC CCTGCTGACT GGCAGAATCA AAAGATCTTT ATCGTCTCAT CTGGAACAGG CTCAACAGTT ACCAACACTC CATTCAAACT CACCCTTTAC CGGACAAGCG GGACAGATAG TGGGAATACT GTGTACCTTG GTAGTTCAGT TCGTTCAGAC TTTGGTGATA TCCGGTTTAC TGATTCCGGA GGTTCACAAA TTCCATATTG GATAGAATCC GTCAGTGATG GAGTTGCAGT TGTCTGGATA AAACCCTCAA GTATCAGCAG TACCGGAACT CAATTCAGTA TATATTATAA CTGTGCTGGA GCAACAAGTC AGTCTGATGG AAGTTCTATC TTCTCCGTCT TTGAAGACTT CGAAGAGAGT GTTTTATCCA GCTGGACTCT GGACTCCGGT GTTACGATGA GTCAGGTAAC TGAGGGTTCA AACAAGGTTG GGCGGTTTAC TTCAAACGGT GTTGCCGGTA GCGGAGCGTA TAAATCCTGG ACTGCTGGTT CTGGAATTAT TGAATATTCC ATCAAACCTG CCCAGACCAC TGCGTATCAT ACTGTTTCAG CGTTTTCCGG TCATGCCTCT GGAATCAAAG GTGCATGGTT CTATGCTGCA AATAATGGTA AATTCGGTTC TGCAACTCCT TCCTGGGCAT ATTTCACCAG TTATACTGCA AATCAGTGGT ATACTGTCCG GCTTGATCTA AAGGGGAACG GATATTATGA TGCATATGTC AATGGAGTGA AAATCGGCAC TGATTGGGCG TATTATGGTA CAACAACCAC TGACCGACTA GGTCTGGTTG GCTGGACAAC CGGAGGTCAG GCATTCTATG ATAATATCAG GGTCAGACCA TATGTTGCCG CTGAACCTGG AATAGAATGG ATTTCATAA
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Protein sequence | MRSNALRQTR SYTSGIGYTV LLLIITVALL LVSCSGIAGA ESVRPPIVVP SVSGPVVAPP GPTGVVHSDG TSVLSETPVN MSEINLESLG YVSSTVTVVS GPPAFLSGWS YRKIHAIGGS PDGDLTNYQM RFVVWRTTGT DSGENVYVGT NVREDYGDLR FTTVAGAQIP YWIESVNATA AVVWVKVPSI PRAGTQIVMY YGNRSAVSES SGSAVFNVFE DFEESVLNGW TLDSGVTVSQ VTEGSNKVGR FTSNGVAGSG AYKSWTAGSG IIEYSIKPAQ TTAYHTVSAF SGHASGVKGA WFFAANIGKF GSATPSWAYF TSYVANQWYT VRLDLKGNGY YDAYVNGVKI GADWAYYGAT TTDRLGLVGW TTGGQAYYDN IRVRKFTNTR PVHGGWLSGV TTEQLAADFS FTPTSGQYPL NVTFTDLSTG PITSRSWDFG DSGSSTEQNP SHTFTGANTY SVTLTVSSTY GQSPSSITKT IVVSAPPSFP ADWQNQKIFI VSSGTGSTVT NTPFKLTLYR TSGTDSGNTV YLGSSVRSDF GDIRFTDSGG SQIPYWIESV SDGVAVVWIK PSSISSTGTQ FSIYYNCAGA TSQSDGSSIF SVFEDFEESV LSSWTLDSGV TMSQVTEGSN KVGRFTSNGV AGSGAYKSWT AGSGIIEYSI KPAQTTAYHT VSAFSGHASG IKGAWFYAAN NGKFGSATPS WAYFTSYTAN QWYTVRLDLK GNGYYDAYVN GVKIGTDWAY YGTTTTDRLG LVGWTTGGQA FYDNIRVRPY VSTEPGIEWI DPSTPLMADF SFTPTSGQYP LNVTFTDLST GPITSRSWDF GDSGSSTEQN PSHTFTGANT YSVTLTVSST YGQSPSSITK TIVVSAPPSF PADWQNQKIF IVSSGTGSTV TNTPFKLTLY RTSGTDSGNT VYLGSSVRSD FGDIRFTDSG GSQIPYWIES VSDGVAVVWI KPSSISSTGT QFSIYYNCAG ATSQSDGSSI FSVFEDFEES VLSSWTLDSG VTMSQVTEGS NKVGRFTSNG VAGSGAYKSW TAGSGIIEYS IKPAQTTAYH TVSAFSGHAS GIKGAWFYAA NNGKFGSATP SWAYFTSYTA NQWYTVRLDL KGNGYYDAYV NGVKIGTDWA YYGTTTTDRL GLVGWTTGGQ AFYDNIRVRP YVAAEPGIEW IS
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