Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3124 |
Symbol | |
ID | 3921960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3397846 |
End bp | 3399309 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637898733 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_504529 |
Protein GI | 88604351 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.125839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000204119 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAACGGGA TAAGTTCAAT TACGCATAAA AGCGAGGACA TCTCGGACAG AAAACTTGCA AAACAATGGA AGAAATTTCC ATTTGCTAAA GCAAGAGATT ATGTAAAGCG ACTTCAGACA CGTATCGCAA AAGCAGTGAA GAACGGCCAA TATCGACTTG CAAGACGACT CCAGTATCTG CTTACACATT CGTTTTATGC AAAAATGTTG GCAGTACAAC GAGTAACCAA AAACAGAGGT AAAAGAAGTG CAGGAGTAGA TGGGGAAAAA TGGACCACCC CTGAACAGAA AATGAAAGCA GCATTAACGC TTTCGGACAA GGGCTATCGG GCAAAACCTC TCCGGAGAAT CTACATCCCT AAACCGCAAT CGAGTAAAAT GCGACCTCTT TCGATTCCAA CCATGTATGA CCGTGCTATG CAAGCTTTGT ATGCAATGGC TCTTATGCCT TGGGCTGAGA CCACAGCAGA CAAGACATCA TTCGGATTCC GAATGAAGCG AAATGCACAG GATGCTGCTT CATACACTTT TCAGTGCTTA AGCAGAAAGA CTTCAGGTCA ATGGATATTA GAAGGTGATA TCCGCGGGTG CTTCGATAAT TTCGCACACC AATGGATGCT TGATAACATC CCTCTTGACC AAAGAATCCT TAACCAATTC CTGAAAGCCG GCTATATTTA TGATGGAATA CTCTACCGTA ACAAGTCAGG TACGCCCCAA GGCGGCTTAA TTTCCCCCTT ATTGGCTAAC ATGGCTCTTG ACGGCATGGA AAGAATGTTG AAAGAACACT TTCCCGGAAA TAAGGTTCAT CTCATACGGT TTGCAGATGA TTTTCTCGTA ACGGCAGACT CACAGGAAAC GGCACTCCAG TGCAAGGAAC TCATCACTGA ATTTCTTCAT GAACGAGGGC TTGAACTCTC TGAGGAAAAG ACCAAAATCG TTCATATCAA CGAGGGGTTC GATTTCCTGG GCTGGAATTT CAGAAAATTC AAAGGCAAAT TCCTGATACA ACCTTCGAAG AAAGCTATTG CCGCAATCAT TGATAAAGTA AGGGTAATCA TTAAGTCGGC GAAGGCCTGG AAACAGGAAG ACCTTATCAA AGCCCTAAAT CCCGTAATTA AGGGATGGGC AATGTATCAC CGGACGGTTT CTGCAAGTAT GACCTTTGGG AAACTTGACT GGGTTGTCCG AAATATGTTG TGGAGATGGG CAAAGCGCCG TCATAATAAT AAAGGGAAGA GATGGATTGC CAGAAAATAC TGGCACCCAA CACTTACCAG AAAACAGGTC TTTAGAACCT CTACTCTTAT AGGAGTTACG CAGTTAACTT TTATTATAGA AAGATCTATA TATATTGACA ACGCCTATAA TATACGTGCC TATAACGAAG CAGCCTTCAG ATGTAGATTA TATCAATTAC CTCATCGCAG CTCGATGCGA CGTTTCTTGT GTAAAAGTCG CTGA
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Protein sequence | MNGISSITHK SEDISDRKLA KQWKKFPFAK ARDYVKRLQT RIAKAVKNGQ YRLARRLQYL LTHSFYAKML AVQRVTKNRG KRSAGVDGEK WTTPEQKMKA ALTLSDKGYR AKPLRRIYIP KPQSSKMRPL SIPTMYDRAM QALYAMALMP WAETTADKTS FGFRMKRNAQ DAASYTFQCL SRKTSGQWIL EGDIRGCFDN FAHQWMLDNI PLDQRILNQF LKAGYIYDGI LYRNKSGTPQ GGLISPLLAN MALDGMERML KEHFPGNKVH LIRFADDFLV TADSQETALQ CKELITEFLH ERGLELSEEK TKIVHINEGF DFLGWNFRKF KGKFLIQPSK KAIAAIIDKV RVIIKSAKAW KQEDLIKALN PVIKGWAMYH RTVSASMTFG KLDWVVRNML WRWAKRRHNN KGKRWIARKY WHPTLTRKQV FRTSTLIGVT QLTFIIERSI YIDNAYNIRA YNEAAFRCRL YQLPHRSSMR RFLCKSR
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