Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3122 |
Symbol | |
ID | 3921958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 3396124 |
End bp | 3396888 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637898731 |
Product | Integrins alpha chain |
Protein accession | YP_504527 |
Protein GI | 88604349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0941302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000197077 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAATCCG GCAGTCTGAC AAACGGATTT AGAATCACCA GATCCGGGAC TCAAAGTAAG ATCGGTATGT CAGATGGCAA GACCTGGCAC CTTGATCTGA ACGGAAACAA TGTCTGGGAC TCTTCGAGTG ACCTTTCTGC CATCTTCGGT TCCGCCGGGT GGAAAGCTGT GTCTGGGGAC TGGAATGGCG ATGGGATCAC CGAACTGGGT ATATCAGATG GCAAGACCTG GTATTTTGAC CTTGATGGGA ATAATGTCTG GGATCCATCC ATAGACAAAA CCAGCATCTT TGGTCTTACC GGCTGGTTTC CGGTCAGTGG TGACTGGGAC GGCGATGGAA CAACCGATAT CGGCGTTGTA AATGGGGATA CCTGGTATCT TGATCTGAAC GGCAATGCGG TCTGGGATGC ATCAACAGAC AAAACATTTA AATTTGGAGC ATCCGGGTGG AAACCTGTCG CTGGTGACTG GAACGGAGAT GGTAAAAGTG AGATCGGAAT ATCAGACGGC AAGACCTGGT ATCTGGACCT GAACGGAAAT AATATCTGGG AACCATCTCT GGATGCGAGT TCTGTCTTTG GTCTAACTGG CTGGCTTCCG TTTACCGGAG ACTGGAACAG TGATGGTATT ACCGAAATAG GAGTTGTCAA TGGTAATACG TGGTATCTGG ATATGGACGG AAACAATGTC TGGGATGCAT CAATCGATAA AACCTTTATT TATGGTACAT CAGACTGGTA TCCGGTATCC GGTAACTGGG TATAG
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Protein sequence | MESGSLTNGF RITRSGTQSK IGMSDGKTWH LDLNGNNVWD SSSDLSAIFG SAGWKAVSGD WNGDGITELG ISDGKTWYFD LDGNNVWDPS IDKTSIFGLT GWFPVSGDWD GDGTTDIGVV NGDTWYLDLN GNAVWDASTD KTFKFGASGW KPVAGDWNGD GKSEIGISDG KTWYLDLNGN NIWEPSLDAS SVFGLTGWLP FTGDWNSDGI TEIGVVNGNT WYLDMDGNNV WDASIDKTFI YGTSDWYPVS GNWV
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