Gene Mhun_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3122 
Symbol 
ID3921958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3396124 
End bp3396888 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content48% 
IMG OID637898731 
ProductIntegrins alpha chain 
Protein accessionYP_504527 
Protein GI88604349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0941302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000197077 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAATCCG GCAGTCTGAC AAACGGATTT AGAATCACCA GATCCGGGAC TCAAAGTAAG 
ATCGGTATGT CAGATGGCAA GACCTGGCAC CTTGATCTGA ACGGAAACAA TGTCTGGGAC
TCTTCGAGTG ACCTTTCTGC CATCTTCGGT TCCGCCGGGT GGAAAGCTGT GTCTGGGGAC
TGGAATGGCG ATGGGATCAC CGAACTGGGT ATATCAGATG GCAAGACCTG GTATTTTGAC
CTTGATGGGA ATAATGTCTG GGATCCATCC ATAGACAAAA CCAGCATCTT TGGTCTTACC
GGCTGGTTTC CGGTCAGTGG TGACTGGGAC GGCGATGGAA CAACCGATAT CGGCGTTGTA
AATGGGGATA CCTGGTATCT TGATCTGAAC GGCAATGCGG TCTGGGATGC ATCAACAGAC
AAAACATTTA AATTTGGAGC ATCCGGGTGG AAACCTGTCG CTGGTGACTG GAACGGAGAT
GGTAAAAGTG AGATCGGAAT ATCAGACGGC AAGACCTGGT ATCTGGACCT GAACGGAAAT
AATATCTGGG AACCATCTCT GGATGCGAGT TCTGTCTTTG GTCTAACTGG CTGGCTTCCG
TTTACCGGAG ACTGGAACAG TGATGGTATT ACCGAAATAG GAGTTGTCAA TGGTAATACG
TGGTATCTGG ATATGGACGG AAACAATGTC TGGGATGCAT CAATCGATAA AACCTTTATT
TATGGTACAT CAGACTGGTA TCCGGTATCC GGTAACTGGG TATAG
 
Protein sequence
MESGSLTNGF RITRSGTQSK IGMSDGKTWH LDLNGNNVWD SSSDLSAIFG SAGWKAVSGD 
WNGDGITELG ISDGKTWYFD LDGNNVWDPS IDKTSIFGLT GWFPVSGDWD GDGTTDIGVV
NGDTWYLDLN GNAVWDASTD KTFKFGASGW KPVAGDWNGD GKSEIGISDG KTWYLDLNGN
NIWEPSLDAS SVFGLTGWLP FTGDWNSDGI TEIGVVNGNT WYLDMDGNNV WDASIDKTFI
YGTSDWYPVS GNWV