| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3111 |
|---|
| Symbol | |
|---|
| ID | 3922000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3384020 |
|---|
| End bp | 3385276 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637898721 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_504517 |
|---|
| Protein GI | 88604339 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0188419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACGT CAATATCAGA CAAATCTCTG ACAAGTATCA TTAATGGATG CCGTATCTCT
GCTTTTTTTG TCCAGAAGAA ATTTTTGTCA AAGTTCTCAA ACAATGAAAA AATTCTTACC
GAAGATCTCC TTGTTACTCT TCCAACTTCC AAATTACCAA ATACAATTCA TGTAAGGGAT
AACGACGTAG CGGTTGTGAT TTTTACTTCT GGGAGCACCG GCACTAAGAA AGGTGTTATG
TTAACTCACG GCAACCTATG TGCTAACACT GAATCAATTG TCCAGTATCT CAAACTCACT
TCCCAGGATC GTGTCTGTGC CACACTTCCC TTTTTTTATT GCTATGGGGC GTCATTGTTA
CACACTCATC TCCGAATCGG AGGAAGTATT GTTATCGCTA ACCATATCTT CCTTGGTGGA
GTTATTCGGG ATATCAATTC TTTTTTCTGT ACTGGATTTG CAGGTGTTCC GAGCACCTAT
CAGATTCTTA TTAATAAAAC TCCATTTTTA AAAGAGGATA TGCCCACACT TCGATACATG
ACGCAGGCTG GAGGGCAATT GCCGAACAAA TACATTAAGA TAATTGCCGA AGCTTTTCCG
CAAAAGGAGT TTTTTGTGAT GTATGGAGCA ACCGAAGCTA CGGCAAGACT CTCTTTTCTT
CCACCTGATA AAGTACTTAC TAAGCTTGGT TCCATAGGAA AGGGCATTCC AGGAGTTACT
CTCGAAGTAA TTAATGGAGA CGGAAAAACA GTACAGTCAG GGGAGACTGG TGAAATCACT
GCTATTGGTG ATAACATTAT GAAGGGTTAC TATGGAGATC CTGAAGGTAC TCAAAGTGTC
ATTAAAAGTG GCCGTCTCCA TACAGGGGAT CTTGCAACTG TTGATGATGA AGGGTATATC
TATGTTATCG GAAGAACAAA AAACATCATC AAATCCGGTG GATATCGTAT CTCCCCCAAT
AAAATTGAAG AATTCATCTG TTCTATTGAT GGAGTCAATG GTTGTGTAGT ACTGGGGCTG
CCCGATGAAA TTATGGGAGA GGCCGTAATC GCTGTTGTCC AACCAGGTAA AATCCCTGAA
TCATCCTTGA GGGAGCAGAT CCTCACACGA TGTACGCAAC ATCTGCCATC TTATAAAATT
CCAAAACAAA TTTTCTTTAT TCAAGAATTT CCTCTCAATG CCTCGAATAA AGTAGATAAA
AAGACACTCG CTGCAATACT TGAGCGAAGA AAGGAGGTAA GAGAAGTTGC CAAATGA
|
|---|
| Protein sequence | METSISDKSL TSIINGCRIS AFFVQKKFLS KFSNNEKILT EDLLVTLPTS KLPNTIHVRD
NDVAVVIFTS GSTGTKKGVM LTHGNLCANT ESIVQYLKLT SQDRVCATLP FFYCYGASLL
HTHLRIGGSI VIANHIFLGG VIRDINSFFC TGFAGVPSTY QILINKTPFL KEDMPTLRYM
TQAGGQLPNK YIKIIAEAFP QKEFFVMYGA TEATARLSFL PPDKVLTKLG SIGKGIPGVT
LEVINGDGKT VQSGETGEIT AIGDNIMKGY YGDPEGTQSV IKSGRLHTGD LATVDDEGYI
YVIGRTKNII KSGGYRISPN KIEEFICSID GVNGCVVLGL PDEIMGEAVI AVVQPGKIPE
SSLREQILTR CTQHLPSYKI PKQIFFIQEF PLNASNKVDK KTLAAILERR KEVREVAK
|
|---|
| |