Gene Mhun_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3089 
Symbol 
ID3921966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3365851 
End bp3366714 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content36% 
IMG OID637898699 
Producthypothetical protein 
Protein accessionYP_504495 
Protein GI88604317 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.231673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.368889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAT CTCAAATTGA TAAAGCTGAA TTCTGGACTA TGGAGATTTC TCCAAAAAGT 
GGGTGGTTGG ATTTAAATCT CCGTGAAATA TGGAGATACC GCGATTTACT GAGATTTTTT
ATGCACCGCG ATTTTGTTGC AAACTATAAA CAGGCGGTAC TAGGTCCTTT CTGGTTCATT
TTAAACCCTC TTTTAAATAC TATCGTCTAT ACAATCATAT TTGGATTAAT TATCAGGGTT
CCAACAGATG GACTCCCCCC GATTTTGTTC TTTATGTCCG GGATAATCAT ATGGAACTAT
TTTTCTGCAT GTGTATTGAA TACATCCAAC ACTTTTCTGG CACACGCGCA TATTTTTGGG
AAAATATATT TTCCACGTTT AATTATTCCT ATTTCAACTG TAATTATAAA TTTGTTAACT
TTTGCAATTC AATTTGGGGT ATATATCTGT TTTATAATCT ATTTTGCATT TCAGGGTGTC
CCTATTCACC CAAATATCTT CATATTGTTA CTTCCTCTAT TATTGATTCA AATTGCAGCA
TTTGGTCTTG GAACCGGACT CATCGTTTCT AGTTTAACCA CAAAATACCG TGATCTTGCC
TATGCAATGG GATTTGGTAT TCAACTTTGG ATGTATGCAA CCCCGATATT TTTTCCGTTG
TCTCTTATTC CGGAAAAATG GCAATGGATT TTTGCTGTAA ATCCGATGAC ATCAATAGTT
GAGACATTTC GGTATATCCT TCTGGGGAAC GGCTATTTTC AACCATGGAT TTTGAGCCTT
GGGGCAGTTA CTACATTAAT TACTCTCATT ATCGGACTGG TGTTGTTCAA CCATATAGAA
AAAACCGTAA TTGATACGGT ATAA
 
Protein sequence
MISSQIDKAE FWTMEISPKS GWLDLNLREI WRYRDLLRFF MHRDFVANYK QAVLGPFWFI 
LNPLLNTIVY TIIFGLIIRV PTDGLPPILF FMSGIIIWNY FSACVLNTSN TFLAHAHIFG
KIYFPRLIIP ISTVIINLLT FAIQFGVYIC FIIYFAFQGV PIHPNIFILL LPLLLIQIAA
FGLGTGLIVS SLTTKYRDLA YAMGFGIQLW MYATPIFFPL SLIPEKWQWI FAVNPMTSIV
ETFRYILLGN GYFQPWILSL GAVTTLITLI IGLVLFNHIE KTVIDTV