Gene Mhun_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3063 
Symbol 
ID3922758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3335147 
End bp3336733 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content52% 
IMG OID637898672 
ProductD-3-phosphoglycerate dehydrogenase 
Protein accessionYP_504469 
Protein GI88604291 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID[TIGR01327] D-3-phosphoglycerate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.737613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATATA CCATCCTTGT TAGTGACGAA CTCGCGGAAG AAGGCATAGA AATTCTTCGC 
GAACATGCCA TGGTGGATGT AAACACCGGG CTTTCTGAAG ATGAACTGGT AGCAACCATT
GAGAATTATG ACGCGCTGCT TGTCAGGTCA GGCACCCAGG TGACCGAGCG GGTCATTGAG
GCAGGCAAGA GACTCCGGTT TATCGGGCGT GCAGGGGCCG GGGTTGACAA TATTGATATG
AATGCTGCCA CCCGTCGTGG CGTGATAGTT GCCAATGCTC CTGAAGGAAA TACCCTGGCA
GCAACCGAGC ATACCATGGC CATGATGCAG TCACTCTGCC GGAATATCCC CCAGGCGAAT
GCATCCATGC AGGCAGGGGA ATGGAAGCGA TCCAAATTCA TGGGTGTTGA ACTGAATGAG
AAGATCCTCG GGATTGTCGG GCTTGGGCGT ATCGGACGAG AGGTTGCAAA ACGCGCATCA
TCATTTAACA TGCATATCAT TGGATATGAC CCATTTATCT CTCCGGATAA AGCAGCGGAG
ATGGGCATCG AATCGATGTC TCTTGAGGCT CTCTTTACCA AAGCCGACAT CATCACGGTT
CATACCCCAC TCATCAAAGA GACCCGGCAT ATCATCAATG AAAAGTCCAT CGCCACGATG
AAAGACGGGG TCCGGATTAT TAACTGTGCC CGTGGAGGAA TCATTGATGA AGCGGCATTG
GCGGCGGCTG TGAAATCCGG AAAGGTAGCC GGGGCTGCTA TCGATGTATT TGAAGAAGAG
CCGCCAAAAG ACTCTCCGCT CATCGGCATT CCAAATATCA TAGTGACCCC CCATCTTGGG
GCAAGTACGG TGGAAGCCCA GAAGAATGTG GCAATCTCCA TAGCAAAGCA GTGTCTTGAG
GTTCTTGGTG GCGGTGATGC GAAATATGTC GTGAATGCGC CGATCATCCC ATCCGAACAA
CATGAGATCA TTGAGCCCTA TGCAACCCTG GGAGAGCGGA TAGGCCGGCT CATGATCCAG
ATCGTTGACG GGCGTGTCCA GAAACTGGAG ATGATCTATG GCGGGGATCT TGCTGCCCTT
GGGCAGTCCA CGAAACTTAT CACCCATATG GCGATCAAGG GACTGCTCGA TCCTATCCTC
CGGTTCCCGG TCAATATGGT AAATGCCGCG TACATTGCCA AGGACAGAGG TATTGCCGTT
TCTGAGACAA CAACCGGCGA GTCTGCAGGG TATAAAAATC TCCTCACCAT GAAGGTAACC
ACTGATAGTT CTGAACTGGT GATCGCCGGA TCAGTTCTGT ATAAGGGTGG CGCGAGGATA
GTGTCAATTG CAGGGTACAC CATGGACATG GTCCCCGAAG GAGCGGTTAT CATCTCACGG
CATCTTGACC GTCCGGGAGT TATTGGCAGG GCATCCACCA TCCTTGGTGA ACATCAGATC
AATATTGCCG GCATGCAGGT CGGCAGATTC CAGCCAGGTG AGGAAGCAAT CATGGTCCTG
AATGTTGATG GGGATGTTCC GGAAGAGGTA ATGGAAGCGA TCCGTGGTAT GCCGGGTATC
TACTCAGCAA AATTTGCCAG GATCTAA
 
Protein sequence
MTYTILVSDE LAEEGIEILR EHAMVDVNTG LSEDELVATI ENYDALLVRS GTQVTERVIE 
AGKRLRFIGR AGAGVDNIDM NAATRRGVIV ANAPEGNTLA ATEHTMAMMQ SLCRNIPQAN
ASMQAGEWKR SKFMGVELNE KILGIVGLGR IGREVAKRAS SFNMHIIGYD PFISPDKAAE
MGIESMSLEA LFTKADIITV HTPLIKETRH IINEKSIATM KDGVRIINCA RGGIIDEAAL
AAAVKSGKVA GAAIDVFEEE PPKDSPLIGI PNIIVTPHLG ASTVEAQKNV AISIAKQCLE
VLGGGDAKYV VNAPIIPSEQ HEIIEPYATL GERIGRLMIQ IVDGRVQKLE MIYGGDLAAL
GQSTKLITHM AIKGLLDPIL RFPVNMVNAA YIAKDRGIAV SETTTGESAG YKNLLTMKVT
TDSSELVIAG SVLYKGGARI VSIAGYTMDM VPEGAVIISR HLDRPGVIGR ASTILGEHQI
NIAGMQVGRF QPGEEAIMVL NVDGDVPEEV MEAIRGMPGI YSAKFARI