| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3025 |
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| Symbol | |
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| ID | 3922926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 3298079 |
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| End bp | 3299326 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637898634 |
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| Product | putative pseudouridylate synthase |
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| Protein accession | YP_504431 |
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| Protein GI | 88604253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1258] Predicted pseudouridylate synthase |
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| TIGRFAM ID | [TIGR01213] conserved hypothetical protein TIGR01213 |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGA CTGAATTATA CCAGAAAGTA ATAGAATATG GAGATATTTG TGACCACTGT
CTTGGTCGGA TGGTCGCGAA ACGATCCTTT GGCCTCTCAA ACGATCAGAG AGGGAAAGGC
ATCCGGATTG CAGCTGCACT GACTTTGAAC CAGCCATATC AGGAACAGAA GGAACCCTGC
TGGATTTGTG GAGACTTTTT TAAGTCCGCA GATGCATGGG CTGACCGGGT CATTGACGCA
TTTTCAGGCA TTGAAGGAAA GACATTTGTC ATCGGATCAA AGGTTCCTCC CCTCATGAGT
GAGTCTGAAG AGATGGTGTG GAGTGATCTC GTCCTCTCTG ATCCTGAACC ACTCAAATCT
GAGATAAACC GTGAGGTAGG AAAACGTGTT GCAGCAAAAT CCTCCCTTGT TGGTGATACG
AAGAACCCGG ATCTGATTGC AGTCCTCAAC ATCAGTGATG GCACCATTGA GGTACAGATT
CGTCCGCTCT TTCTCTATGG AAGATATTTT AAATACGAAC GGGGGATCCC CCAGACTCAT
TGGGCATGCA GAGCCTGTAA GGGCGCCGGG TGTGAAGCGT GTGACGGGAC CGGAAAACAG
TACCGGGACT CGGTGGAAGA ACTCATCGGT GCACCTCTGC TCCCCATTTT TAAGGCAGAA
CGGGTGTTTC TTCACGGCGC AGGACGAGAA GACATCGATG CGATAATGGT AGGGTCAGGA
AGGCCGTTTA TCCTGGAGAT TGTGAATCCC CGGATCAGGG ATGCTGATCC AAAAGCCCTC
GAAGATGCCA TTAATAAGTA TAATGAAGGC CGGGTAGGAG TAACTGACAT CAGATGGAGT
GCCCGATCAG AGGTGGAAAC CTTAAAGAGT CACAAAGGGC ATAAAAAATA CAGGATTCTG
GTCGATATAG ACGGTTCCGT CCCGGATACT GCCCTTCAAT CAGCCGTACA GCAACTATCG
GGGGCTTTAA TTCGTCAGCG CACGCCGACA CGAGTAGCCC ACCGGAGAGC AGATAAAGTA
CGTGAACGGG GCGTTCTCGA TATCAGATAT ACAGGAAAAG AGGGAAAGGA CTTCGTACTT
GAGGTCACCG GTGAAGCCGG CCTGTATATT AAGGAGCTGA TATCCGGTGA CCAGGGACGG
ACGACGCCTA GTCTGACAGA GGTCCTGAAC ACTCCTGCAC GTGTTGTACA GCTCGATGTC
ATTCACGTAG AAGGAATAGA TCAGGTGAAA TCTCATGGCA CTTCATAA
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| Protein sequence | MDLTELYQKV IEYGDICDHC LGRMVAKRSF GLSNDQRGKG IRIAAALTLN QPYQEQKEPC
WICGDFFKSA DAWADRVIDA FSGIEGKTFV IGSKVPPLMS ESEEMVWSDL VLSDPEPLKS
EINREVGKRV AAKSSLVGDT KNPDLIAVLN ISDGTIEVQI RPLFLYGRYF KYERGIPQTH
WACRACKGAG CEACDGTGKQ YRDSVEELIG APLLPIFKAE RVFLHGAGRE DIDAIMVGSG
RPFILEIVNP RIRDADPKAL EDAINKYNEG RVGVTDIRWS ARSEVETLKS HKGHKKYRIL
VDIDGSVPDT ALQSAVQQLS GALIRQRTPT RVAHRRADKV RERGVLDIRY TGKEGKDFVL
EVTGEAGLYI KELISGDQGR TTPSLTEVLN TPARVVQLDV IHVEGIDQVK SHGTS
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