Gene Mhun_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_3009 
Symbol 
ID3922831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3286972 
End bp3288390 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content53% 
IMG OID637898618 
Productexodeoxyribonuclease VII, large subunit 
Protein accessionYP_504415 
Protein GI88604237 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA TCGATCAGGT GATCATGGAC CAGGCAACAC TCGACAACTG GACGAAAAAG 
GACGGCCCCG TGACACTCCG GGTTTCAGAA GTCTCCAGAA TGATTACCCG GCTCCTGGAG
GATCCATCCC TGCAGAATAT CTGGATAATC GGGGAGATTA CCAATTTTAA GAGACACAGT
TCTGGTCATC TCTATTTCTC CCTGTCCGAA CAGATTGCCG GAAAGGAGTC TGTGGTTTCA
TGTGCCATAT GGAAAAGTGC CGCACGATAC CTGGATTTTA CACCCGATGA CGGGATGGAG
GTCCGTGCCT ATGGCTCTAT CTCTCATTAT GAACCAGGAG GCCGGTACTC CTTTCAGATA
ACCCAGATGA GGCCGTCAGG TGCCGGAGAG CGGGCACTCC TAATTGAGGG GTGGAGGCGT
GAGATGGCCG CGAAAGGATG GTTCAGCCCT GATAGAAAAC GCATTCCACC GAGGTATCCG
GTCAGGATTG GAGTAGTCAC CTCCTCGACT GGTGCGGTGA TCCATGACAT CAGGAATGTC
ATCTCGAAGC GGTTTCCTGC TGAAATAATC CTTTCACCAA CCATGGTGCA GGGAGCATCT
GCTCATGAGG AGATCGCCCG GGCAATCATC AGGGTACAGG ATATGGTGGA TGTTATCATC
GTCGGTCGGG GAGGAGGGAG TTATGAGGAT CTCTTCGCAT TCAATCACCC CTGTGTGGTC
GAAGCCATCG TCACGTGCCC GGTGCCGGTG ATTGCCGCAA TCGGTCATGA AGTGGATATC
ACGCTTGCCG ACCTTGCCGC TGATGTGAGT GCCTCTACCC CCTCACATGC AGCAGAGCAG
TGCGTACCCG ACCGGGAGAG TGAGCTCGAT GCCCTCATAC ATATGAGAAA GCGGATGTTT
TTACAGCTCA TGAACCGGCT GGAATCAGCA CAGGAAGACC TGAATGGGAT CAGAGATCGC
CTCTCCTCCC CACGATTACT TCGTGAAGTA AGGATGCGGC AGGAGGCTCT CGCAGATCTG
ACCGACCGCA TGGAACGGGG AGCTCAGGGA TTAAAAGATA GAGCACAATC CAGACTTGCT
GAACTTCGTG GCCGCCTTGA GGGGAGAAAC CCGCTGGTGT ATCTCAGGCG CGAACTTCCG
GAACGAAAAA ATTTCCTTGC TGAAATAAAG GGGCGGCTTT CCTGTGCAGT TCAGGTCAGA
CTTCAGGCAG AGCGTGCCGA ACTCACATCA TTGTCTGCCA TTCTCAAAGC ACGGGGTCCT
GAAGCCCTCT TTCAGGCCGG GTACTGCATG GTCAGTTCAG CAGGGACGGT AATCAGATCC
TGTACTGAAC TTACCCCTGG TAAGATGGTG ACGATACGAC TGAGGGATGG AACCGCAGAT
GCAGCAATAA CGCAGGTGTA TCATGACAAA AAAGTATGA
 
Protein sequence
MKIIDQVIMD QATLDNWTKK DGPVTLRVSE VSRMITRLLE DPSLQNIWII GEITNFKRHS 
SGHLYFSLSE QIAGKESVVS CAIWKSAARY LDFTPDDGME VRAYGSISHY EPGGRYSFQI
TQMRPSGAGE RALLIEGWRR EMAAKGWFSP DRKRIPPRYP VRIGVVTSST GAVIHDIRNV
ISKRFPAEII LSPTMVQGAS AHEEIARAII RVQDMVDVII VGRGGGSYED LFAFNHPCVV
EAIVTCPVPV IAAIGHEVDI TLADLAADVS ASTPSHAAEQ CVPDRESELD ALIHMRKRMF
LQLMNRLESA QEDLNGIRDR LSSPRLLREV RMRQEALADL TDRMERGAQG LKDRAQSRLA
ELRGRLEGRN PLVYLRRELP ERKNFLAEIK GRLSCAVQVR LQAERAELTS LSAILKARGP
EALFQAGYCM VSSAGTVIRS CTELTPGKMV TIRLRDGTAD AAITQVYHDK KV