| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2888 |
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| Symbol | |
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| ID | 3924183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 3171057 |
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| End bp | 3172148 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637898500 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_504299 |
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| Protein GI | 88604121 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0343951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCGCA GGGAATTTAC CTCCTCCCGA AAACTTGATC ACCTTCGTAT CTGTCTTGAT
GAACATATTG AATCCGGCAG CACCGGCTTT GATGATATCA GGCTAGTCCA TGAAGCACTC
CCCGACTGTG ATATGGACCG TCTGTCACTT GAGACCCGGT TTTTAGGGCA TAATCTGGGT
TCTCCCCTGT TTATATCTGC CATGACCGGC GGACATCCGG AGACAAAAGA TGTCAATGCG
GTTCTTGGAG AGATAGCCGG TGAATTTGAC CTTGGTATTG GTGTCGGATC CCAGCGGGCT
GCAATAGAAA ATCCCGAGCT GGCCGATACG TTCTCTATCG TCAGGGAAAA AGCACCCGAT
ACGTTTATTG TCGGGAACCT GGGCATTGTG CAGCTCAGGG ATCATGGCAT TGAGTGGGCA
GAACGTGCGG TTGAGATGAT AGATGCAGAT GCCCTGGCAA TTCATCTCAA CTTCCTTCAG
GAAGCAATTC AGCCGGAGGG AGATCATGAT GCAGGCGGAT GTTATGCCGC TCTTCGTGAA
CTCTGCAGGG ACCTGAAGGT TCCGGTAATA GTAAAGGAGA CCGGTTCGGG CATTTCATAT
GAAACCGGGA TCCGGTGCTT TGGTGCAGGA GCAGCATGTG TGGATATTGG TGGATATGGA
GGCTCATCAT GGGCTCTCAT TGAAAGCCAC CGGTCGGGGA GTGTTGCCGG TAAAGAAGAT
CTGCACCTGA AGGGATTAGG CGAGCGGTTT GGAGAGTGGG GTCTTCCGAC TGTAGTGAGC
CTGTATGAAA CAACCCGGTG CGGGGGACCG GTTATAGCAA GCGGGGGGAT TCGATCCGGA
ATAGATATCA CGAAGGCACT GGTAATGGGT GCCCATCTTG CCGGAATGGC ACTTCCACTC
TTAAAACCCG CCTGCGAAGG CCCTGATGTA TTACGGGAAA CTATCCGGAC CATTCACCAG
GAACTCCGGA TAAGTATGTT CCTTACCGGA AAAACCCGAA TATCCGAGTT ACCACAGGCC
CGGTGGTATC TCACCGGTAA GACACGGGAA ATGATAGAAA ATCTTCCAGG AGGAGACAGA
ATTGGACATT GA
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| Protein sequence | MNRREFTSSR KLDHLRICLD EHIESGSTGF DDIRLVHEAL PDCDMDRLSL ETRFLGHNLG
SPLFISAMTG GHPETKDVNA VLGEIAGEFD LGIGVGSQRA AIENPELADT FSIVREKAPD
TFIVGNLGIV QLRDHGIEWA ERAVEMIDAD ALAIHLNFLQ EAIQPEGDHD AGGCYAALRE
LCRDLKVPVI VKETGSGISY ETGIRCFGAG AACVDIGGYG GSSWALIESH RSGSVAGKED
LHLKGLGERF GEWGLPTVVS LYETTRCGGP VIASGGIRSG IDITKALVMG AHLAGMALPL
LKPACEGPDV LRETIRTIHQ ELRISMFLTG KTRISELPQA RWYLTGKTRE MIENLPGGDR
IGH
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