| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2882 |
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| Symbol | |
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| ID | 3924177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 3163940 |
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| End bp | 3165583 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637898494 |
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| Product | DNA ligase I, ATP-dependent (dnl1) |
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| Protein accession | YP_504293 |
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| Protein GI | 88604115 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.812327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTTC TTGAATTTGC AGAATTGTGT TCCAGGCTTG AGAAAATATC AGGAAGACTG
GAGACCATCT CCATTCTGGC AGAGACGATA TCATCTCTCT CTGATGATGA TCTTCCTCAT
TTCTGCCGCC TTATTCTGGG AAAACCCTTT CCGGAATGGA GTGGGAAAAA GCTCGGTGTC
GGTCCGAATC TCCTGTATGA AGCTGTTGCC TATGTTACCG GCAGAAAACG TGAGGAAGTC
ATTGACCGTC TGAGCCGGGT CGGGGATGCC GGTGCTGCGG TTGAAGAACT CCTCTCCCAG
AAATCACAGA CATCTTTTTT CACCGTTGAA CTGACTCTTG CTGACATTAT GGCTGCCCTT
ATCGAGATAT CCGGAATGGA GGGCGGACGA TCCCAGAAAG AAAAGGTCCG GGTTATCCAG
CGAATACTCT CCAGTGCCTC ACCTCTTGAG GGGCATTACA TCACTGCAAT TCTCCTCGAA
GATTTTCGGA TTGGGGTCGG TGAAGGAAAC CTTCGGGATG CCATCGCTCA GGCCTTCTCA
GTCGACCCGA ACCTTGTTGA GTATGCGAAT CAGGTCAGAA ATGACATGGG AGAAGTCGCG
GTGCTGGCAC GAAAGGGAGA AGAAGCTCTC CGCTCAGTCC GGCTGGTTCC GTTCCATCCG
GTCAGGATGA TGCTTGCACG GCAGGGAACA ATATCAGGTG TCCTAAAAGA AGGAGATCCG
GTTGCGGTTG AGTTCAAGTA TGATGGGGCG AGGTTTCAGT TCCACAAGCA GAACAAAACC
TGCAGGATGT ACTCCCGCCG GCTTGAAGAG GTCACCAATG CGATGCCTGA TGTTGTTGCA
CTCCTTGACG AGGCTCTTCC TGATGACATT ATTGTGGATG GAGAGGTTAT TGCAGTTCAG
GGCGGCCACC CAATGCCATT TCAGACCGTT CTCCGGAGGT TTCGAAGAAA GCACAATGTA
GCCGAGGCAG CGGATGCTAT CACGATGATC CCAAACCTCT TTGACATCCT CTACTACAAT
CAGGAGATGC TTATTGATCT GCCATTTCGC GAGAGACGGA ATATACTGAC ACAGGTTGCA
TCCAGGTATG TAACCCCTCA GCTCGTATCG GATGATGAGA CAGAGATAGA GGCATACTAC
CACACCGCCC TTGATGCTGG TCATGAGGGA GTCATGCTGA AATTACAGGG GTCACGGTAC
ACACCCGGTG TCAGGGGAAA AGACTGGGTG AAGATAAAAC CGGAGGCCGA TACCCTGGAC
CTTGTGGTAA CCGGTGCAGA GTGGGGTGAA GGGAAACGTG CTCATGTTTT TGGATCTTTT
TTACTTTCAG TCAGAGATGA TGACAGACTG GTTCCTATAA GCCGGGTTGC CACCGGGTTT
TCAGACGAAC AACTGATCTG GTTGTTTGAC ACCCTGCAGG ATGATATTAT CAGGAAAGAT
GGGAAAATGG TTTATTTTGA ACCCAGGCTG GTCTTTGAGA TCGGGTATTC GGAGATTCAG
AAAAGTCCCA ATTACGAGGG AGGGTATGCT CTCCGGTTTC CCCGGTTTAT TGAGGTACGA
GAAGATAAAG ACCTGAAAGA AGCAAATACG GCAGAAGATG TCGAGGAGAG ATATATACAG
ACACACAGTT CTCTAAATAC ATGA
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| Protein sequence | MIFLEFAELC SRLEKISGRL ETISILAETI SSLSDDDLPH FCRLILGKPF PEWSGKKLGV
GPNLLYEAVA YVTGRKREEV IDRLSRVGDA GAAVEELLSQ KSQTSFFTVE LTLADIMAAL
IEISGMEGGR SQKEKVRVIQ RILSSASPLE GHYITAILLE DFRIGVGEGN LRDAIAQAFS
VDPNLVEYAN QVRNDMGEVA VLARKGEEAL RSVRLVPFHP VRMMLARQGT ISGVLKEGDP
VAVEFKYDGA RFQFHKQNKT CRMYSRRLEE VTNAMPDVVA LLDEALPDDI IVDGEVIAVQ
GGHPMPFQTV LRRFRRKHNV AEAADAITMI PNLFDILYYN QEMLIDLPFR ERRNILTQVA
SRYVTPQLVS DDETEIEAYY HTALDAGHEG VMLKLQGSRY TPGVRGKDWV KIKPEADTLD
LVVTGAEWGE GKRAHVFGSF LLSVRDDDRL VPISRVATGF SDEQLIWLFD TLQDDIIRKD
GKMVYFEPRL VFEIGYSEIQ KSPNYEGGYA LRFPRFIEVR EDKDLKEANT AEDVEERYIQ
THSSLNT
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