Gene Mhun_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2873 
Symbol 
ID3923830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3153227 
End bp3154414 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content49% 
IMG OID637898485 
Productmajor facilitator transporter 
Protein accessionYP_504284 
Protein GI88604106 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.896526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGA GTGATCCAGT TCTCATTACC GAAACGGATC GCCGGTTATT ATTCATATCA 
CTCTATGTGG CCGTTTTTTC TACCATGCTT GGGATTGGTA TTGTCATACC GCTTCTTCCC
CGTTTTGCCG AAACCCTTGG TGCTTCCGGA TTTGGGATCG GAATGATTTT CTCCTCGTTT
GCATTATCGC GGGCTTTCGC CATGCCATTC TTCGGAAGAT ACTCCGATAT CTGTGGCAGA
CGTCAGTTCA TCATAATCGG TCTGCTCCTC TATGCGATTT TTTCTCTCCT CTATGTCCCG
GCTGGATCAG TGCTTGAGCT ATCCGGTATC CGGTTTCTTC AGGGGATTGC ATCAGCCATG
GTGTTCCCCA TAGCAATGGC ATATATCGGT GATATCGCTC CACCCGGAAT GGAAGGACGG
TATCTTGGGA CGTTTACCAG TTCACTCTTT CTGGGCATGG GTCTGGGGCC TTTTCTTGGG
GGCATTGTAA CCGATATTGC CGGCATGGAT ACAGCATTTA TTTGTATGGG GGCGCTAACC
GGGGTGGCAC TGCTTACCTG CATCTTCTTC CTCCCCGGGT ATCAGGGGTC GCGAAAAGAA
CAGAGTTCGA TACTTCATCT GCTCATTCAT CCAGGGCTTC GCATTCCATT ATTATATCAA
ATGATGAATG CATTTGCAAA TGGAACATTT ATGGTCTTTC TCCCCGTCAT TGCCGCCCAT
GTCGGGAACC TCTCTGCAGG AGAGACCGGC CTTGTAATAT CGGTATCAGT TCTGTCAACT
GCCCTTTTGC AGAGAGTATG CGGAAGGCTT GCAGATCGGT TTGATAAATA TCTGCTCATT
GCAACAGGGT GTCTTACGGT AACCGTTGCA CTGGCTCTGG TACCTGGCTT TGAAGGCCTC
TGGTCATATC TCTTCTTTGC CCTCCTCATG GGGATCGGAG GAGGTATATC AGTCCCGGCC
ATGTATGCCC TGGTCACCAT AGCCGGCAGG GACGTGGGGC AGGGGGCAGC GATGGGAACG
ATAAACATGG TCATGAGCAT GGGTATGATC ATATCTCCCG TTGTCTGCGG ATTATTCATG
GACCAGACCG GGATTAGTTC AGTTTTTTAT TTGTCTGCCG TAATAGTCCT CGTTGTCACC
CCGGTATTTC TCTCAAAGGC TTCTTTTTTT CCATCACAAA GGAGGTAA
 
Protein sequence
MPASDPVLIT ETDRRLLFIS LYVAVFSTML GIGIVIPLLP RFAETLGASG FGIGMIFSSF 
ALSRAFAMPF FGRYSDICGR RQFIIIGLLL YAIFSLLYVP AGSVLELSGI RFLQGIASAM
VFPIAMAYIG DIAPPGMEGR YLGTFTSSLF LGMGLGPFLG GIVTDIAGMD TAFICMGALT
GVALLTCIFF LPGYQGSRKE QSSILHLLIH PGLRIPLLYQ MMNAFANGTF MVFLPVIAAH
VGNLSAGETG LVISVSVLST ALLQRVCGRL ADRFDKYLLI ATGCLTVTVA LALVPGFEGL
WSYLFFALLM GIGGGISVPA MYALVTIAGR DVGQGAAMGT INMVMSMGMI ISPVVCGLFM
DQTGISSVFY LSAVIVLVVT PVFLSKASFF PSQRR