| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2856 |
|---|
| Symbol | |
|---|
| ID | 3923684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 3139661 |
|---|
| End bp | 3140827 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637898468 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_504267 |
|---|
| Protein GI | 88604089 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.258995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA ACACTCACCC TATTATTTCT GTTGTTGGCC CGTCGACCAG ATTTCTATCA
GGTATCAGTT ATTATACCAT CAGACTCTGT AATGCCCTGT CTGAAAAAAG TGCAGTCCAT
GCAGTACTAT TTCGGAATAT GCTCCCAAAA CGGCTTTTTC CGGGATGGAA GCGGGTGGGT
GTCACTACCA GCTCAGTCGG CTTTTCAGAT ACAATAGATG TCGCTGAAGT TCTTGACTGG
TATAATCCCT TTTCATGGGC AACAGGGGCT CAGAGGATCA GGAGATCGGA TGTGGTCATC
CTTGAATGGT GGACATCCAG TGTCATGCAC ATGTTCCTTG CCCTGCTCCT GCTCTCCGGC
AGGAAAGCCA GGATAATCAT TGAGTTTCAT GAAGTAGTAG ATCCCCTGGA GTACGCCATC
CTTCCGCTCC GGATGTACGC AAAGGTGATG GGCAGGATCA TCCGGCGAAA CGCTTCCCGG
TTTATTGTTC ACTCAGAGCA TGACCGGGAG CTGATTGCAT CCCAATACCG GATAGATCCA
TCCCGGATTA CTGTAATTCC TCATGGACTC TATGACCAGT ATCCGATTCT GAGTAAAGAA
GAGAGTAAAT TACAGCTCGG AATCGGGGGA AACTTTGTCC TTTTATTCTT CGGTCTGCTC
AGGCCATACA AGGGTGTATC CCATCTTATT CAGGCATTTG AAAAACTCCC TTCTTATCTT
CTTGAGGAGA CCGTCCTTGT TATTGCCGGA GAGGCCTGGG AAGACCAGGA GTCTCTTAAT
CGTATCAAAG AATCACCAGT CTCTGACAGG ATAATTCTTG AAAACCGGTA TATTTCAGAT
GAGGATATTC CAGTGTTTTT TTCTGCCGCA GATCTCCTGG TGCTTCCCTA TACCCGTGCC
TCCCAGAGCG GGGTAGCCCA TATCGGCATT GCATACGGTC TTCCCATACT GGCGACACAG
GTGGGAGGAC TTGTTGAAAG CCTTGGATCC TATGCAGGGA CCAGATTTGT CAGGCCTGGT
GATAATGACG GGCTTGCTGA TACAATAAAA GATCTGATAC TCCACAAAAG TCAGGATCGG
TACGATCCCC CTGAAGAGAT GAGATGGAAC AGGATTGCAG AGAGGTATTT GAACGAGATA
GTCAATCCCG TTCAGGAGAA GATATGA
|
|---|
| Protein sequence | MRKNTHPIIS VVGPSTRFLS GISYYTIRLC NALSEKSAVH AVLFRNMLPK RLFPGWKRVG
VTTSSVGFSD TIDVAEVLDW YNPFSWATGA QRIRRSDVVI LEWWTSSVMH MFLALLLLSG
RKARIIIEFH EVVDPLEYAI LPLRMYAKVM GRIIRRNASR FIVHSEHDRE LIASQYRIDP
SRITVIPHGL YDQYPILSKE ESKLQLGIGG NFVLLFFGLL RPYKGVSHLI QAFEKLPSYL
LEETVLVIAG EAWEDQESLN RIKESPVSDR IILENRYISD EDIPVFFSAA DLLVLPYTRA
SQSGVAHIGI AYGLPILATQ VGGLVESLGS YAGTRFVRPG DNDGLADTIK DLILHKSQDR
YDPPEEMRWN RIAERYLNEI VNPVQEKI
|
|---|
| |