| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2821 |
|---|
| Symbol | |
|---|
| ID | 3923168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3095281 |
|---|
| End bp | 3096639 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637898430 |
|---|
| Product | transposase, IS4 |
|---|
| Protein accession | YP_504232 |
|---|
| Protein GI | 88604054 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.425297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC CTTCTTCTAA GGGTCAAAAA AACCTAAAAT CTTGGGTATT TCAGAAATTT
ACCTTTGATT TTATAGAAAA AAAAGCTCGG GAAACAGGAT TTATGCAGAG AAAACGGAAA
CTCGATCCTG TCCTTTTGAT ATTTTCCCTC ATTTTTGGAG TCAGCAGTCA TCTAAAACCC
ACATTAGAGG AGATTCATCG TCATTATGTT GATCTTGATG ATAATCCAAA GATTGAAACC
TCAATTCTTA ACCAAAGTTT CAGGAAACGG TTTAATTATA AATTAGTAGA TTTTTTGAAA
TCCCTGATGG ATCATTATAT CGATCAAATA GTTCATCAGT CCCCTGCTCA TTTAAAGGGA
ATTGTTGAGG ATTTCAAAGA TATTTTAGTT CAAGACAGCA GCATTATTCG AATTAGTAAA
AAGCTCTACG ATTTGCATCC CGCAGCACGT TCCCGTGACG ATTCTGCAGG ATTAAAGATC
CATGCAGTTT ACAGTGTTGT TTACCATTCT GTAAAAAATG CAATAATTAC AACAGAAAGA
GTTCATGACT ATAAGATGCT AAAAATTGGA CCTGATGTTG AAAATATTCT CCTGATTAAC
GATCTGGGAT ACTATTCTCT GAAAACATTC TCTAAAATTC AAGAATATGG AGGTTTTTTT
GCTAGTAGAG TAAAAAGCAA TGCCGTTTTT AAGGTTGTTT CAATCAATTC AGGCCCTCCA
GAAATAACAT CAATTGTAGA TCATAATTGC TTTAAAAGCA TAAATGGTGA TGATTTTTTA
GATAGAATGC CAAAGAAAGG TGTTTATGAT CTCATCTGTT CATTTCATAT TGGAGACAAG
CATATTAACA AAATTAAAAC TCCAATATTT CAAGAATTCA GGGTAATTTG TTCTTGGAAT
CCTCTCACTG AAAAATGGCA TCTCTACATC ACAAATCTCG GAAAAGAGGT TTTTTCTGCT
GATGATATTT ATGAGTTATA CCGATTTCGC TGGGTGATTG AACTTATTTT CAAGGAATTG
AAAGGGGATT ACGACCTTGG AAAAATGTTA CTCAATAATG AACCAATGGC GTTTATTCAC
ATTTATTCCA TGTTGCTACG GTTTATTATT AGCAGAGATC TGTTTACCTG GATTGTATCT
ACGACTCGAA AAAATGATAA AGGAAAATAT ACTCAGATGC TATGGTCAAA AGTATTTTCA
GAGAAAGGAT TGGAGTTTTT GAGCATATTG AATCAAAATT TATTTGGCAC AGGCAATGTT
AAGAAACGAT GGGATAAATT AGAAAGATCA CTGCGGCACC TTGGCAAAAG CCGCAACAAT
AACGAAACTC TCACCTTGAA ATTTTCAGAA ATTCAATAG
|
|---|
| Protein sequence | MKKPSSKGQK NLKSWVFQKF TFDFIEKKAR ETGFMQRKRK LDPVLLIFSL IFGVSSHLKP
TLEEIHRHYV DLDDNPKIET SILNQSFRKR FNYKLVDFLK SLMDHYIDQI VHQSPAHLKG
IVEDFKDILV QDSSIIRISK KLYDLHPAAR SRDDSAGLKI HAVYSVVYHS VKNAIITTER
VHDYKMLKIG PDVENILLIN DLGYYSLKTF SKIQEYGGFF ASRVKSNAVF KVVSINSGPP
EITSIVDHNC FKSINGDDFL DRMPKKGVYD LICSFHIGDK HINKIKTPIF QEFRVICSWN
PLTEKWHLYI TNLGKEVFSA DDIYELYRFR WVIELIFKEL KGDYDLGKML LNNEPMAFIH
IYSMLLRFII SRDLFTWIVS TTRKNDKGKY TQMLWSKVFS EKGLEFLSIL NQNLFGTGNV
KKRWDKLERS LRHLGKSRNN NETLTLKFSE IQ
|
|---|
| |