| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2808 |
|---|
| Symbol | |
|---|
| ID | 3923021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3081152 |
|---|
| End bp | 3082534 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898419 |
|---|
| Product | tRNA CCA-pyrophosphorylase |
|---|
| Protein accession | YP_504221 |
|---|
| Protein GI | 88604043 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
|---|
| TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.235509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTT CACCACTTGA ACAGTCAGTT CTCGCAGAGA TACGTCCCAC CAAAGAAGAA
CTTGATCGGA TGTACGCCCT TGCAGACCGG CTTATTGCAG ATATCCGTGG ATCCGGCAAG
GCTGACGGTA TGATGGTCGG ATCGGTTGCC AGAAAGACCT GTGTGCATGG TGACCGGGAC
CTTGATGTAT TTATGCTCTT TGATCCTGCC CTGCCACGTG AAGACCTGGA ACGGGAGGGC
CTTGCCCTTG CATGGAGCAT TGCACACCAA TATACCGATA TAATCAGGGA GAAGTACGCC
GAACACCCGT ACCTGAATGC GACGATAGAT GGTTTTGATG TCGATCTTGT CCCCTGTTAT
CAGGTAAAGG AGGCGACCGA TATCCAGAGT GCAGTTGATC GGACACCATT TCATAACCGG
TATATCTCTT CACGTATCGG TGATTTTACC GATGACGTTC TCCTTTTAAA GCAGTTTGTC
AAGGCAGGCG GAGTCTATGG GTCTGATCAG ATGACGGAGG GGTTTGCCGG ATACCTGTGT
GAACTCCTGG TCCTACATCA TGGCGGGTTT CATAACCTGC TCAAGGCCGC AGCAGGCTGG
AAACCCGGAA TGTTCATCGA TATTGAGCAG CATGCAGCCA AATGGTTTGA TGAACCACTG
GTTGTCATCG ATCCGGTTGA TCCCTGCCGG AATGTATCGG CCTCCGTGTC AGATACAAAA
CTTCTTGAGT TTATTGAGCT CTGCCAGGGG TATCTGAAAT CACCGTCAAA GTGGTTTTTT
TACCGCCCAC CGATCTGTAT CCTGACCGAG GAAGAGGTCA GCGCCCTCTT GAAAGGTCGT
GAGTCTGCAT TTCTTGCGAT CACCCTGAAA ACCCCGCCCT ATATTGAAGA TATTGTCGTC
CCACAACTTC GGAAAAGTCT GCATACGTTG GTTGATCTTT TAAAAAGGCA TGAGTTTGTG
GTTATACGGG CAGATACGTG GATGCTTGAG GATCGAAGTA TGCTCCTCTT TGAGCTCCTT
GTTGACACTC TTCCGGCGGT CAGGTTCCAT GCAGGTCCAC CGGTCACCGC CCATGTCAAT
GCGGCAAAGT TCATTGACAA GTATATTCAT TCAGATATCA TCTTTGCCGG GCCATTCATT
CGTGACGGCC GGTACGGGGT GGAACTTCCC CGGCGCTACC GGCAGGCCTC CGATCTCCTC
TCCTCAAATG AAGTATTTGG AACTGCTCTT GGCAAGCATG TCAAGCATTC CATGAAAGAG
GAGTTTGTTG TCCATTCAGG GCTTGAGTGC TGGCAACCCG GGTTTGAACC ATTTATCAGT
GAGTTCCTCC AGAAAAGCAG CCCGCTTGTG CGGATACGGC GGGCTGAAGC ACGAACCTCA
TAA
|
|---|
| Protein sequence | MTFSPLEQSV LAEIRPTKEE LDRMYALADR LIADIRGSGK ADGMMVGSVA RKTCVHGDRD
LDVFMLFDPA LPREDLEREG LALAWSIAHQ YTDIIREKYA EHPYLNATID GFDVDLVPCY
QVKEATDIQS AVDRTPFHNR YISSRIGDFT DDVLLLKQFV KAGGVYGSDQ MTEGFAGYLC
ELLVLHHGGF HNLLKAAAGW KPGMFIDIEQ HAAKWFDEPL VVIDPVDPCR NVSASVSDTK
LLEFIELCQG YLKSPSKWFF YRPPICILTE EEVSALLKGR ESAFLAITLK TPPYIEDIVV
PQLRKSLHTL VDLLKRHEFV VIRADTWMLE DRSMLLFELL VDTLPAVRFH AGPPVTAHVN
AAKFIDKYIH SDIIFAGPFI RDGRYGVELP RRYRQASDLL SSNEVFGTAL GKHVKHSMKE
EFVVHSGLEC WQPGFEPFIS EFLQKSSPLV RIRRAEARTS
|
|---|
| |