Gene Mhun_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2755 
Symbol 
ID3922704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp3023348 
End bp3024052 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content49% 
IMG OID637898366 
ProductTPR repeat-containing protein 
Protein accessionYP_504169 
Protein GI88603991 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATT CTTATGAGTA CTGGTTTCTT GCCGGTATGC TGCTCCATCA GGAGGGCAGA 
TTATCTGAAG CAAAAGAAGC CTATGAGCAG GGCCTGGTCT GTGATCCGAA TAATTCCGCT
CTTCTCAACA ACCTGGGAAA TGTCCTGTCT GATCAGGGTA ATCATACGGG GGCACTTGCC
CGGTACGAGG CGGCACGGGA TAGTGGAGGG GGTGATTCTG TCATCCTCGG AAATATCGGC
CGGACGTTAT TTCTGCTGGG GGAGTATGAC AAAGCCATTG AGATGTGCCT CGAAGCAACA
GCACTGGATA CCCAAAATTC CATCGCCTGG TACTATGCTG CGACTGCATA TTATGAACTG
AACCAGTATG AAAAAGCCAT CGAATATTTT CACAAGGCTC TTGCATTGAA TCAGTCATTT
GCCCTGGCAT GGAATAACCT CGGCAATGTC CATATGCAGC GTGGTGAATA TGACGAGGCG
TTCAAGGTCT ACAACAAAGC CTTGGATTCA GATCGGAATC TCACCCAGGC ATGGTATAAT
CGTGGTGTTC TGCTCTTTGC AACTAAACGA TATTGTGAGT CTGTCAGAGC ATTTGAAGAG
GTCATGCGGA TAAAACCCGA TGATATGGAT GCCCAGGAAC GCCTTCGTGT AGCAAGAGAT
GAGTGTGAAG CAGATGCAAC CCTCCTGACC GGTTCCCTGG AATAA
 
Protein sequence
MDDSYEYWFL AGMLLHQEGR LSEAKEAYEQ GLVCDPNNSA LLNNLGNVLS DQGNHTGALA 
RYEAARDSGG GDSVILGNIG RTLFLLGEYD KAIEMCLEAT ALDTQNSIAW YYAATAYYEL
NQYEKAIEYF HKALALNQSF ALAWNNLGNV HMQRGEYDEA FKVYNKALDS DRNLTQAWYN
RGVLLFATKR YCESVRAFEE VMRIKPDDMD AQERLRVARD ECEADATLLT GSLE