Gene Mhun_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2727 
Symbol 
ID3922200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2999771 
End bp3000472 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content53% 
IMG OID637898338 
Productvon Willebrand factor, type A 
Protein accessionYP_504141 
Protein GI88603963 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTAG AAAAACTTGA AGACATCGTT GATATCCCCT ATCCGCAACA TCCCCACTGT 
GCCACGGTCC TGGTCCTTGA CACATCGGCA TCCATGTCAG GCAATAAGAT AGCAGAGCTG
AACGAGGGCC TTCGCATCCT CACCGATGAA TTGAAAGAGG ACGATCTTGC GGTAAAACGG
ATAGATCTTG CCGTGATAAC CTTTGGGAAA GGGGTTGAAC TGGTCAGGCC CTTCACCGGC
ATATCGGCAT TTGACCCTCC GGAACTCTCT GCCGGCGGGT ATACTCCCAT GGGTCAGGCT
ATTCTTGAGG CTGTCCGGCT TGTTGAAGAG CGAAAGGCCG AGTACCGGAC CATCGGAACC
GATTACTACC GCCCCTGGAT ATTTTTAATC ACCGACGGTC AGCCGACAGA TATGCGCAAA
GGTGACGAAA TCTGGGAGAA GGTTATTGAG GCGGTGCATG GGGGAGAGAG GGATCACAAA
TTCCTCTTCT GGGCGCTTGG TGTTGACCAG GCCAATATGA CGGTGCTCCG TGAGATATCT
CCTCCGGGCA GGACCCCGCT CATGCTCAAG GAAGCGAAAT GGGCCGAGAT GTTCCTCTGG
CTTTCAAAGA GTCTCTCCCA GATATCAGAC TCCCGGATTG GTGAACAGAT ATCACTAGAG
AACCCGGTTG GTCCTGAAGG CTGGGGAGTA ATTCAGCTCT GA
 
Protein sequence
MGLEKLEDIV DIPYPQHPHC ATVLVLDTSA SMSGNKIAEL NEGLRILTDE LKEDDLAVKR 
IDLAVITFGK GVELVRPFTG ISAFDPPELS AGGYTPMGQA ILEAVRLVEE RKAEYRTIGT
DYYRPWIFLI TDGQPTDMRK GDEIWEKVIE AVHGGERDHK FLFWALGVDQ ANMTVLREIS
PPGRTPLMLK EAKWAEMFLW LSKSLSQISD SRIGEQISLE NPVGPEGWGV IQL