Gene Mhun_2725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2725 
Symbol 
ID3925133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2995624 
End bp2998989 
Gene Length3366 bp 
Protein Length1121 aa 
Translation table11 
GC content51% 
IMG OID637898336 
Productprotein kinase/helix-hairpin-helix DNA-binding domain-containing proteins 
Protein accessionYP_504139 
Protein GI88603961 
COG category[R] General function prediction only 
COG ID[COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.29791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGT CGTCCGGATC AGAACCAAAA ATCCGGATTG ACCGTACCGT AATAGAGGTC 
TCTCCTCTCT CATCAGGTCC GGTTCGCGAA GAACTGGTCA TCATGAACGA GGGAAAGGGA
CGCCTGTATG GAAATATCCG TTCAGATGCA GACTGGGTTA CTGTTCTTGA CACAAATCTG
AATACCACCT TTATCCAGCG GGTAATTCTT GAGATACGGC CTGAAAGAGC CCCGGCAAGT
GGGGAGTCAT CGGTTCATAT TCTCTCAACC GGTGGAATCG GGCGGGTAAA GATTGAGATC
AGAAAAGCCC CAACACCAGT ATCAGCGCTT CGGATGGATG AGAAGGTCTT CCAGTTTTGC
GGTATTACGA AAGATGAACC AATCTCTTTT TCATTGACGG TCAGAAATGC CGGCTCCGGT
TTTTTATCAG GAACCGCAGT TCCGCTCTGT GACTGGATTG AGATACCTGC CCGGGGCATC
TGGACACGGA CGGTGCAGGT CATCCCGGTC AGAGTTATCA CTTCGAAAGC CCCGAAAGCC
CGACATCCGA TCGGAAGGAT TCATGTAAAG ACGAATGGCG GGGAGGAGAC GGTTGAGGTA
TCCATTCACC GTTCACAGGA GAAAGGACCG GTTCCCCGGT TTATGCCATC TTCACTTCGC
ATATCCTGGA CTGTCCGGGG TATCATCGAA GAGCGTCTTA TCGTGAAGAA CACCGGAGCA
GGAACCCTTC GGGGAACTAT TCCTTCAAAA TATCCCTGGA TAACCGCAAT TCCGTCAATA
TTCTCCGTCA CCGACAGCAC CATGGTTACG ATCAGAGTGG ATACACGCCT GCTACCGGGA
CATGTTCCAG CATCAGTTCA GCTGGTGATC ATCACCAATG TCGGGCCATT CACGCTGAAT
ATCGAGATCT CACGTTCATA TCTGGCACAG GAGAAAGCAC GGATCCGTCT TCCCAGAATA
AAGACCAGAT CACGAATGAC TGTCCTTGAT CAGCATGGTG GTCAGCTGCA GATACTATCA
TCCGGAAAAT CCGGCGGCGA AGGGGAGATA TGGTATGTGG AAGGTGATGA AACACGGTGT
GTGAAGATAT TTCATCCGCA CCGAAGCAGT CCTGAGATGG AAGAGAAGAT CCGGATCATG
CAGAAGAGTC CGATCCGGAT TCCTGCCGGT ACGGGGATCT GCTGGCCGTC GGGTATCATC
CTCTCACAGG CTCCCTCACG GTTTCTTGGA TACCTGATGA CCCGCCTTGA TAGCAGATTT
ATGCCGGTGC ATGCCTGGTA TGATAAACCT GACCAGGATT TTTCCTTCTC AATGAAGGCA
GCAGCACGAC TTGCCAGTCT TGTCCATGCG GTCCATGCAT CCGGACACTG TGTTGGCGAT
CTTCGTGAGA ATAATGTTTT TATCAGCACG AGCGGAGAGA TATGTCTCAT CGATACCGAT
TCTTTTCAGA TAACAGACCC GTCATCCTCA CGGACATGGT TCTGCCGGGT CGGGACAGGA
GAATACCTGC CTCCCGAACT GATAGACGGA TCGTTTGAGA AGCAGGATAT TGACCGGCTC
TTTGCTGACC GGTTTGCCCT TGCCGTCCTT ATCTTCAGGT TCCTGATGCA GGGAGCCCAC
CCGTACCAGG GACGGGGACC GCTCATCGAG GATGCACCCA CCACTCCGGA TAAGATTATT
CGTGGCCTAT TTGCGTATGA AGGAAAGATA CCAGGATTGT ATCCTCCTGA CTATGCCCCG
CCCTACGACC GGATTCCGTC ATCGGTCCGT GCCCTGTTTC ATGAGGCATT TGTGACCGGT
CACCAGCACC CGCAGGCCCG TCCCGAACCC TCACGATGGG CACAGGTTCT GGGATTTTCA
TATGATGGCA GACTTGCTGC AGACCCGAAA GTTCTGATAC GGGTGACGGG TTCGGAAATA
AAAACAACGC CTGAATCAGT ATTGGTACCA ACAAAACCGA TTGTACCGGA CTATATCGAC
GATGAGGGAT GTTCGCTTGA TGTCGGAGAC AGAATTGTTC GCATTTCTCA TGGGGAGATT
CGAAAAACCG ACCGTGACGG GTTTCAGCTC CTTATCAGCA TGAACCGCCT CACTCCTCTG
TTATCATGCC CGGTTAGTCA GGTACCGCCA TCGGTGATAG TCCCGGAAAA AATGGTCTAC
CAGAACCAGG GGCCTGAAAA ACGGATACAT TATCTTATTC CTGATATTGA TTTCAGCCGG
TACGTTCATT GGCACGAGGC AGCAGATCCT GAAACCCGCA CATCGTGGAG AGGAGAAAAG
TTTTCATTCA GGTACCGGGT TGCAGCATGC ACAAATCTTC TCTCCGCTCT TCTCTCCATG
AGTCGGGTGG GACTCTCTCC ATTCAGCCTG TCCCCCCGTT CTGTCTTTGT CGGTCCGGAC
AGTTCAGTTC GGGTTCTTGC AGTATCGCAG GAGCAGGTGA GGACCGATGA AGAAGATAGA
AGGTCCCTGC TTTCCGAGAT CAGAACCCTT CTCTGTAACA TGATGATGGA CGGATGTGAT
CCCGCTCAGG TCTTTAATAG AAGAGCCCGA TATCGGTTCT CTGTTCCTTC TCCTGACCGG
ATTCCGTTTC CGATGAGGAG TATCTTTTCA GGATCGCAGG ATTGTTCTGG ATCACTTGAA
GATATCCTCT CCTGCTGGTT TGAACGGTCT GAACATGCAT TCCTCTCCCT CGTTTCCTGC
CCGGCTGATC CTGATCACTG GTTCTGTACG TATCCCGGAC TTTGTCCATT CTGTTATCCG
GATCAGTCTG CACGTCTTCT CCTGGCCCCT CGTCCCCGGT GCTGTATATT ACCGACAAGA
GTTGTGTTTC TGCTGTCAGC ACCAGTACAT ACGGTCAGGC ATCTGAAACG AAGACGGGTA
CAGCGGGACC GGATAGTGAT CCCGGTTATT CCTCTTCCAT TCTGCATGAC CTTCCCGCTC
CGGATATCTG CCAGATTCAT ACCAATTCTT GCAGCCCGGA ATGGTGATAT GGTATTGCTG
CCGGTGTGTT ATACACGCTC ACTTCCGATA TGTATTCCCT GGATGACTAC CGCTCTTGTC
ATCATTCCTC CGTTATTTTC ACTTGAGGCA CTTATCCTGA AGAGGTTTGA TATCTCGCTC
ATTGATGAGA TGCGATGGGT ATCCTCACTG GAACAGATGA AAGGGAACTT CTTCCCACGG
CTGGTTCGTG TAAAGAGGGT ACGGCGTCAA TATGTGAGAA AAACCATATC CGTCATGTTG
TTTCCCGGAT TTTTTGAAAA ACCAGCGAAA ATTGCTCCAT CAAAAGGAAA GAAAGGAAAG
AAGGGAAAGA CAAAGGGACA TCTCTCAAAA AAATTAGCTG AATTCATCGA GGAATTTTTC
GGATAA
 
Protein sequence
MTGSSGSEPK IRIDRTVIEV SPLSSGPVRE ELVIMNEGKG RLYGNIRSDA DWVTVLDTNL 
NTTFIQRVIL EIRPERAPAS GESSVHILST GGIGRVKIEI RKAPTPVSAL RMDEKVFQFC
GITKDEPISF SLTVRNAGSG FLSGTAVPLC DWIEIPARGI WTRTVQVIPV RVITSKAPKA
RHPIGRIHVK TNGGEETVEV SIHRSQEKGP VPRFMPSSLR ISWTVRGIIE ERLIVKNTGA
GTLRGTIPSK YPWITAIPSI FSVTDSTMVT IRVDTRLLPG HVPASVQLVI ITNVGPFTLN
IEISRSYLAQ EKARIRLPRI KTRSRMTVLD QHGGQLQILS SGKSGGEGEI WYVEGDETRC
VKIFHPHRSS PEMEEKIRIM QKSPIRIPAG TGICWPSGII LSQAPSRFLG YLMTRLDSRF
MPVHAWYDKP DQDFSFSMKA AARLASLVHA VHASGHCVGD LRENNVFIST SGEICLIDTD
SFQITDPSSS RTWFCRVGTG EYLPPELIDG SFEKQDIDRL FADRFALAVL IFRFLMQGAH
PYQGRGPLIE DAPTTPDKII RGLFAYEGKI PGLYPPDYAP PYDRIPSSVR ALFHEAFVTG
HQHPQARPEP SRWAQVLGFS YDGRLAADPK VLIRVTGSEI KTTPESVLVP TKPIVPDYID
DEGCSLDVGD RIVRISHGEI RKTDRDGFQL LISMNRLTPL LSCPVSQVPP SVIVPEKMVY
QNQGPEKRIH YLIPDIDFSR YVHWHEAADP ETRTSWRGEK FSFRYRVAAC TNLLSALLSM
SRVGLSPFSL SPRSVFVGPD SSVRVLAVSQ EQVRTDEEDR RSLLSEIRTL LCNMMMDGCD
PAQVFNRRAR YRFSVPSPDR IPFPMRSIFS GSQDCSGSLE DILSCWFERS EHAFLSLVSC
PADPDHWFCT YPGLCPFCYP DQSARLLLAP RPRCCILPTR VVFLLSAPVH TVRHLKRRRV
QRDRIVIPVI PLPFCMTFPL RISARFIPIL AARNGDMVLL PVCYTRSLPI CIPWMTTALV
IIPPLFSLEA LILKRFDISL IDEMRWVSSL EQMKGNFFPR LVRVKRVRRQ YVRKTISVML
FPGFFEKPAK IAPSKGKKGK KGKTKGHLSK KLAEFIEEFF G