| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2627 |
|---|
| Symbol | |
|---|
| ID | 3922363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2899908 |
|---|
| End bp | 2900951 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637898240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_504043 |
|---|
| Protein GI | 88603865 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGA CATCACTCAC TATCCGGAAT TTCAAAAAAT TCGATGATGT GACGATACCT
CTTGGAGACC CGGTGGTTTT TATCGGCCCG AATAATTCAG GAAAAACCAC GGCCCTTCAG
GCACTTACTC TTTTTGCGAT CGGCATCTCC AAAATTCTCG GAAAAAAGGA GACTGACTTC
CCTGATAAAG AAACACCAGG AATCACCATA AACCGCAGGG ATCTTCTCGC GGTTCCTGTT
CCTGCAGCCT CATTGCTCTG GCGTGATCTT CAGATACACA GAATGGCTCT GCCAGAGAGA
CAGCAGGCTA CACCAGACAT CCCGATTGTA ATTATTGTTG AAGGAATTAC CAACAATAAA
CCCTGGGTAT GCGGTCTTGA ATTTGATTAT GCCAACCCGG AGTCTCTCTA TTGTCGCCCG
ATAAAAGACA AAACCGGGCA TGTATATCCT ATTCCAAAAG AGATTACCGG GTTTGCCATA
GCATTCCTTC CGCCGATGTC AGGTCTTGCA GCACATGAGA TTAAGTTAGA GACCGGAGCC
ATTAACGTAA AGATAGGTGA AGGCAGAACA GCAGACGTTT TGAGAAATCT TTGTTATCAG
ATAAGTTCAT CAAGCGATAC TGAACCCTGG ATTTCGGTTG TCAATACTAT CAGAGAACTG
TTTGGAGTCA CCCTGCATCC TCCGGAGTAC ATTATTGAAC GGGGGGAAAT TACTATGGTC
TATGAAGAGA TGGGGACCGG AGTCATCCTT GATATCTCAT CAGCAGGCAG GGGATTACAT
CAGACACTTC TCCTTCTTGC CTATGTGTAC TCACATCCAG GAGCCGTTCT CCTTCTGGAT
GAACCGGATG CCCATCTTGA AATATTACGA CAACGTCAGA TCTTTAATCT CCTCATCCAT
TCTGCACGAA AAACAAACAG TCAGATCATT GCAGCAAGTC ATTCTGAAGT TGTCCTGAAT
GAAGCAGCGG ATAAGGCTGC TGTAGTGGCA TTTATCGGGA AACCCCATCT TATCGAAAAG
AAGGCAAGGC TTGAAAAGTC ATGA
|
|---|
| Protein sequence | MTLTSLTIRN FKKFDDVTIP LGDPVVFIGP NNSGKTTALQ ALTLFAIGIS KILGKKETDF
PDKETPGITI NRRDLLAVPV PAASLLWRDL QIHRMALPER QQATPDIPIV IIVEGITNNK
PWVCGLEFDY ANPESLYCRP IKDKTGHVYP IPKEITGFAI AFLPPMSGLA AHEIKLETGA
INVKIGEGRT ADVLRNLCYQ ISSSSDTEPW ISVVNTIREL FGVTLHPPEY IIERGEITMV
YEEMGTGVIL DISSAGRGLH QTLLLLAYVY SHPGAVLLLD EPDAHLEILR QRQIFNLLIH
SARKTNSQII AASHSEVVLN EAADKAAVVA FIGKPHLIEK KARLEKS
|
|---|
| |