Gene Mhun_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2611 
Symbol 
ID3922321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2884290 
End bp2885399 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content51% 
IMG OID637898224 
ProductL-tyrosine decarboxylase 
Protein accessionYP_504027 
Protein GI88603849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG AAGGGCTCTC AACCGACGAA CTTTTTTGTT TTTTACAGGC GAAGCGGAAT 
GAGGACTTTT CCTATTCGCA TATCCTCTCC TCCATGTGTA CAACACCCCA TCCGGTAGCG
GTACAGGCAC ATAACCTCTT TATGGAGACA AACCTTGGAG ATCCCGGGTT ATTTCCGGGT
ACGGCCACCC TTGAGGACCG GCTGATCCGG TGGTTTGCAG ATCTCTACCA TGAGCCATCT
GCTGGCGGAT GCACAACGTC CGGGGGAACT GAGTCAAATA TCCAGGTGCT GAGATTTTGT
AAGAAAACAA AAAATGTGAA GGAACCAAAT ATCATCGTCC CCGCGTCGGC ACACTTCTCA
TTTGAGAAGG CATGCGGGAT GATGGATATT GAGATGAGGG TGGTCCCGGT AGACGAACAA
TACCGGATGA AGACCGATGC AGCAGGAGAA CTCATCGATA AGAATACCTG CTGTATTGTT
GGTGTTGCCG GAACCACGGA GTACGGGATG ACCGACCCTA TCCCGGCCCT TGGAAAATTG
GCTGAACAGG AGGGAGTCCA TCTCCATGTG GATGCGGCGT TTGGCGGATA TGTCCTCCCC
TTTCTTGATG ATGCCCCCCC CTTTGATTTT TCAGTCCCCG GAGTTGGATC CATCGCAGTA
GATCCACACA AAATGGGATT AAGCACCATA CCGTCCGGAG TCCTGATGGT GCGTGATGAG
CGGGTCTTTT GTAATCTCCT GGTGGAGACA CCATACCTCA CCACAAAGCA GGCATACAGC
CTGACCGGAA CACGACCTGG TGCATCGGTG GCTGCAGCAT ATGCCGTTAT GGCCTATCTT
GGACGAAAAG GGATGAAGGC TCTTGTCACC GGCTGTATGG AGAATACCAG GCGGATGATT
GAAGGCATGG AGGCATTTGG TGTTCACAGA AAGGTTACCC CGGATGTCAA TGTTGCAACT
TTTGAGCATG TCAGTGTTCC CTCCCCTTGG GTGGTCTCAT ACACACGGAA AGGCGACCTT
CGTATCGTCT GTATGCCTCA TGTCACCCGC GATGTTGTGG AAGCATTCCT GTCAGATTTT
GGAGAATCAT ATGTATCCCA TATTAGTTAA
 
Protein sequence
MDAEGLSTDE LFCFLQAKRN EDFSYSHILS SMCTTPHPVA VQAHNLFMET NLGDPGLFPG 
TATLEDRLIR WFADLYHEPS AGGCTTSGGT ESNIQVLRFC KKTKNVKEPN IIVPASAHFS
FEKACGMMDI EMRVVPVDEQ YRMKTDAAGE LIDKNTCCIV GVAGTTEYGM TDPIPALGKL
AEQEGVHLHV DAAFGGYVLP FLDDAPPFDF SVPGVGSIAV DPHKMGLSTI PSGVLMVRDE
RVFCNLLVET PYLTTKQAYS LTGTRPGASV AAAYAVMAYL GRKGMKALVT GCMENTRRMI
EGMEAFGVHR KVTPDVNVAT FEHVSVPSPW VVSYTRKGDL RIVCMPHVTR DVVEAFLSDF
GESYVSHIS