| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2606 |
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| Symbol | |
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| ID | 3923649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | - |
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| Start bp | 2877649 |
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| End bp | 2879580 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637898217 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_504022 |
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| Protein GI | 88603844 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATT ATTATACTCT GAAATTTCTG AAGTGTATAC TTTTTACTAC ACTTATTACT
GGATATCTTC TGTTTGCTGG ATGTGTAGAT GATAAACCAA TTGATGTTAC GAATATCTCT
ACAAATCTTA CGATCCAGGC AGAGGATAAA GAACAGAATG GTAGTGCAAT GGAGGCTTTG
TCCCTCTATG ATGCGGCAAT CAGGCTGAAT TCATCTGATG CAGGTCTCTG GCTGAAGACC
GCAGATCTTT TATTCAATGA ATCAATGAAC ACCGAGGCAA TTATCGGCTA TTCTCATGTT
CTGACCCTAG ACTCTGAAAA CAGCTCGGCA CTCATCGGGA GAGGTGCAGT CTATGCCAGG
AATGGAGATC TGATGAGTGC CCTGGCTGAT TTAAAGAATG CAACGGCTTT TCATCCCCGG
AATGCACAGG CTCATGCAGG TCTTGGAGAT ATTTACTCTG CACTGAATGA AACAGAACAG
GCACTCCGGG AATATGGGAT TGCCATTAAC CTGAGTCCGA AAAATTACGA GTTTCATGTG
AAAAAGGCAG AACTGTTGTA TGACTCGGGT CGATATAATG AAGCCGCTAA AGAGTATGAC
AATGCCTTAA AGCTCAATTT GAAAGATGCC AGATCATGGA AGCGTCTTGG TGAGATGCTC
CGGTTGTCAA ACCGTCTGGA AGAGGCAGCG GTTGCTTATA AACAACTCAA TACCCTGATT
CCTGATAATC CTGATAATCT GTTTATTGAG GCCGAACTCC TTGAGAAAAC TGGAAAATAC
AAAGAGTCGA GGGAAATTTA TGCACAGCTG GTCAAGGATG ATCCAAAGAA TGTTGATCTC
CTCGTGGCTT TAGCCAGGGT TCAGAATGTT CTAGGGGAGT TTGATGAATC AGCAGCCATT
TCACGCAGCG CCCTCATGGT AAACCAGAGT AATGCCGATG TATGGGCAAA TCTTGGTTTT
TCATATGCCA ACCTGAAGAA ATTTGATGCA TCTTTTGATG CGTTTAATCA ATCATTGAAA
ATTCAGCCGA ATGATCCTAT TACTATCACG AATGTCGGAT TTTTACTGAT GCAGTCCGGA
CGGTATCAGG ATGCTCTGTA CCGGTTTGAG AACGCAACCA TGATTGATCC TGATGATCCG
GCAACCTGGA TGCAGAAAGC ACGTGCTGAA CTTGCACTTG GGAAACGGGA TGATGCACAG
CGGTCTGCTA CCCGTGCAAC CAAACTCGCT CCGTATTCGT ATGATGCCTG GTACCTTCTC
GGTGATGTAG CAGCAGTGAA TAAGCAGTAT GATGTTGCAA AGGAAGCATT CGAGACGGCT
CTTCAGATTA ATCCGATGAA AGAAGACGCA TTCAAGTATC TGGTAGAAGT CATGCGTCAA
TTAAACCAGG CATATGATAC CATTCATTAC TATGATCGGG CAATCGCAGA AAATCCCGAT
ATTCCGATTG CATGGATGAG AAAAGGGTAT GCCGCTGATC TTGCAAGTGA ATATGGGATC
AGTGAGGATG CATACGCCCA GGTTGTCAGG ATCTCTCCAC AAAGTACTGA AGGATGGACA
AATCTCGGAT TTGCACGATT TCAGCAGGGT AATTATTATG GGGCTATCGA TGCCTTTAAT
GAGTCTTTGA AGATTGATCC AAATCAGTCG GTGTATTATG TGAACCGGGG TGCTGCATAT
CAGAAGATCG ATCTCCTGGA TAATGCATAT AAAGACTTTT CAAAAGCCCT TGAATTGAAC
CCTGATAACC GGGATGCACT CTATGGAATG GGAAAGACCC TGTACAAAAT GGGAAAAGTC
CAGGAGGCAT TCCCCTATTT CAAGAAGATT GGAGAGAATC TCTATATAGC CAGGGTCTAT
GATTCCCTCT ATCAGGGAGT GACATATTTC TCCAATAACT GGAACTACTG GCGGTATTCC
TACCAATGGT GA
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| Protein sequence | MSNYYTLKFL KCILFTTLIT GYLLFAGCVD DKPIDVTNIS TNLTIQAEDK EQNGSAMEAL
SLYDAAIRLN SSDAGLWLKT ADLLFNESMN TEAIIGYSHV LTLDSENSSA LIGRGAVYAR
NGDLMSALAD LKNATAFHPR NAQAHAGLGD IYSALNETEQ ALREYGIAIN LSPKNYEFHV
KKAELLYDSG RYNEAAKEYD NALKLNLKDA RSWKRLGEML RLSNRLEEAA VAYKQLNTLI
PDNPDNLFIE AELLEKTGKY KESREIYAQL VKDDPKNVDL LVALARVQNV LGEFDESAAI
SRSALMVNQS NADVWANLGF SYANLKKFDA SFDAFNQSLK IQPNDPITIT NVGFLLMQSG
RYQDALYRFE NATMIDPDDP ATWMQKARAE LALGKRDDAQ RSATRATKLA PYSYDAWYLL
GDVAAVNKQY DVAKEAFETA LQINPMKEDA FKYLVEVMRQ LNQAYDTIHY YDRAIAENPD
IPIAWMRKGY AADLASEYGI SEDAYAQVVR ISPQSTEGWT NLGFARFQQG NYYGAIDAFN
ESLKIDPNQS VYYVNRGAAY QKIDLLDNAY KDFSKALELN PDNRDALYGM GKTLYKMGKV
QEAFPYFKKI GENLYIARVY DSLYQGVTYF SNNWNYWRYS YQW
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