| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2588 |
|---|
| Symbol | |
|---|
| ID | 3923205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2861167 |
|---|
| End bp | 2861604 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637898199 |
|---|
| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
|---|
| Protein accession | YP_504004 |
|---|
| Protein GI | 88603826 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT CTCCATCATT TAACCGGTCG CTCTGGGTAT TTCATGTGAA TTCAGGGTCC
TGTAACGGAT GTGATATCGA GATCGTCGCA GCACTCTGCC CCCGGTATGA CCCTGAACGG
TTTGGAATCA AACTTGTCGG ATCACCACGG CATGCAGATG TTCTGCTTGT CACCGGTCCG
GTCACCCACC AGATGAGAGA CCGGGTAAAA CGGGTATATG AGCAGATGGC TGCTCCGAAG
GTGGTCATGT GTGTGGGAAC CTGTGGTCAG TCCGGAGGAG TGTTTTATGA CTCCTATAAT
CTTGACGGAC CAATCGACCA GGTGATTCCG GTGGATGTGT ATGTTCCAGG CTGTGCACCC
CGGCCCGAAG CAATAATATA TGGTGTGGTG CAGGCGATTG CAAAACTTGA ACGACTAGAA
AAGGAGGTGA GTTCATGA
|
|---|
| Protein sequence | MKLSPSFNRS LWVFHVNSGS CNGCDIEIVA ALCPRYDPER FGIKLVGSPR HADVLLVTGP
VTHQMRDRVK RVYEQMAAPK VVMCVGTCGQ SGGVFYDSYN LDGPIDQVIP VDVYVPGCAP
RPEAIIYGVV QAIAKLERLE KEVSS
|
|---|
| |