Gene Mhun_2563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2563 
Symbol 
ID3922820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2844509 
End bp2845129 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID637898175 
Productsiroheme synthase 
Protein accessionYP_503981 
Protein GI88603803 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.999316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCC TGATGATTGA CTTTACCGGC AAGAAAGTAA TCATTTTCGG GGGAGGGGTT 
ATCGGAGCCA GAAAGGCACG GTACTTCGCA TATGAAGCAG ACGTCCTCGT ATACAGTCGT
TCTTTTCACC CGGAGTTTCA GGAGATCCCG GTCAGAACTG AGGTCTGCAA TCTGACTGGA
GACCTTGAAA TCCTGCGAAA TATGATACAC GATGCGTCGC TGGTCATCGC TGCCACATCA
GATCCTGAAT TAAACGAGCT GATTGAAAGC GCCTGCGCCC GTGAACATAT CTGGTGCAAT
GTAGCGGCAG GGAAACGGGG TGATGTCGTC CTTCCCGCAA AGATATCAGG GAACCGGTAT
GTCATCGCAG TCAGCACCTC CGGCTCGGTC CCGGCTGTAT CACGACTGGT CCGTGAAGAA
ATCGAGAAAA CGTTTCCTGA TCTTGACGAT CTCATCCTCC TGGGCGAATG GATCCGGGAC
ATCTACCGGG GGGATCGGGC CGGTACCGAA TCATATGATA CCGTCCTGTA TACTGTTCTT
CGTGACCCTG AAACAAGAAA AGCCCTCACG AATGGGATGA ATGCAGCCCG GGAATATGTG
CAGAGGAGAT TTGCACTATG A
 
Protein sequence
MIPLMIDFTG KKVIIFGGGV IGARKARYFA YEADVLVYSR SFHPEFQEIP VRTEVCNLTG 
DLEILRNMIH DASLVIAATS DPELNELIES ACAREHIWCN VAAGKRGDVV LPAKISGNRY
VIAVSTSGSV PAVSRLVREE IEKTFPDLDD LILLGEWIRD IYRGDRAGTE SYDTVLYTVL
RDPETRKALT NGMNAAREYV QRRFAL