| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2508 |
|---|
| Symbol | |
|---|
| ID | 3924776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2787859 |
|---|
| End bp | 2788455 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637898120 |
|---|
| Product | 30S ribosomal protein S3Ae |
|---|
| Protein accession | YP_503927 |
|---|
| Protein GI | 88603749 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1890] Ribosomal protein S3AE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.662669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGA AAAAACCAAC AGGCAGAAGA GTCGACGGAT GGAAAGCAAA ATCCTGGTAT
AAGGTGTACA GCCCTGACAA TGTGGGAAAA GTATACCTTG GTGACACCGT GGCAGATGAT
CCGTCCAAAC TTATGGGACG GGTCATGCAG GCACCGCTCT CAGAATTGGT AAATGACTAT
ACCAAGCAGA ATGTAAAGAT GAAGTTTGCT ATCACGAATG TAGCAGGTGA TGCAGCATAC
ACCTCATTCA TTGGTCATGA ACTTGCGCGT GATTTCATCA GATCACTGGT AAAACGCCGT
ACCTCAAGGA TTGACTGTGT GGTAAACTTT GTCAGCAAGG ATGGCTGCAA GGTCCGTGCA
ACAGTTACCT GTTTCACGCT CACCCGTGCA GACCAGAGTC AGCAGCACGA GATAAGAAAA
ATTCTTACCG ATGATGTTCT GACCTTTGGC AAAGAGAATG AACTCGGTGT TTTTGTGAAC
AATATCATCA ACGGCGATCT TGCAAAGGAA CTCTTTAAGA AAGTAAAAGA GCTTCACCCG
GTTCGTCGTG TTGAAGTAAT CAAAACCAAG GTTGAGCTCC CGAAGAGTTC TGCCTGA
|
|---|
| Protein sequence | MAAKKPTGRR VDGWKAKSWY KVYSPDNVGK VYLGDTVADD PSKLMGRVMQ APLSELVNDY
TKQNVKMKFA ITNVAGDAAY TSFIGHELAR DFIRSLVKRR TSRIDCVVNF VSKDGCKVRA
TVTCFTLTRA DQSQQHEIRK ILTDDVLTFG KENELGVFVN NIINGDLAKE LFKKVKELHP
VRRVEVIKTK VELPKSSA
|
|---|
| |