| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2497 |
|---|
| Symbol | |
|---|
| ID | 3924765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2770723 |
|---|
| End bp | 2775318 |
|---|
| Gene Length | 4596 bp |
|---|
| Protein Length | 1531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637898109 |
|---|
| Product | PKD |
|---|
| Protein accession | YP_503916 |
|---|
| Protein GI | 88603738 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3291] FOG: PKD repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0721492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGA ACATATCTAA AGGAGTGCTT GCTGCGCTCT TATGTATTCT CTTATGCTGC
ATTGTGATGG CAGATAATCA GGAAATAAAT TATACTGATA TTTCTGCACA TCCGGTGCAG
TTTATCGAAA ATGCCGGACA GGCACACGAA GATATTCTGT ATCAGGTGAA AAGTTCTGAA
TTTTCATTTG ATTTTACCAA AGATGCTCTT CTGGTAAGTG GTCCGTCCGG TGACTGTGAG
GAGTGTGGAG AGAATGTCAC TACTCCGGTG ATTGTAACAG TTGCAGATGC TGAAGAGAAC
GTCACCGTTG AGGCATTTGA CAAACTTGAT GGATATGCAA ACTTCCTCAT CGGGAAGAAT
GAGTCAGACT GGCAGCAGTA TGTTCCCTGG TATGGGGGCA TCCGGTATCG CGAAATACTT
CCTGGAATTG ATCTCTCCTA TTCCGGAAAG CAGGGTGTTC TCAAACGGGA GTTCACCGTC
CGGGAAGGCG CCGATCCCAA TGCCATCCGA CTCATTTATG GAGGAAACGA GGGGTTATCG
CTCACAGAAG ATGGTTCCCT GCAGGTAGTT ACGTCGTTTG GTAATCTGAC CGAACGGTCT
CCTTATTCTT ATCAGATAAT TGAAGGCAAT ACTATTGAGG TTGAGTCTTC ATACCAGATT
TTTGAAAATG GTGAGGTCGG GTATACTATT GGAGAATATG ATCCTGCCTA TCCGCTTATA
ATTGATCCGT ACCTAGAATA TTCCACCTTG CTTGGGGGAA ATCTCGAAGA TTATGGTATG
GATATTGCCA GGGATTCTTC GGGGGATGTG TATGTGACCG GATATACGTC GTCGTGTAAT
TTTCCGTTAC GAGATCCAAC GGTCATTAAT ACTGCATATC TTAAATTTAA TGGTTCATAT
TGTCATAACA GTCGGGATGC ATTCATAACG AAAATTGGGA TCAACCAGAC AACTGGAAAT
GCATCCATCA TATTTTCAAC GTATCTGGGT GGAGATAAGG CAGACTTTGG CAGGGGAATA
GCAGTTGACT CCCTGAAGAA TATTTACGTG ACTGGAGACA CATTCTCTGA AGACTTTCCA
ATAATGCTTC CGTTTGCCTA TGGTGACAGG CTTCATGGGT CAAATGATGC ATTTGTTATA
AAATTGGATC CGACCGGCAC AATTATCAGA TGGTCTGATT ATCTTGGAGG AAATTTTGCC
GATCAGGCGA ATGATATCGC CCTTGACAGT CTGAATGCGG TGTATCTGAC TGGTCAGACG
GTTGGGAACA GTCCTTACAA GAAACTGGAA CAGGTCTTCC CAACAACCCC GAATGCGTAT
CAGACTGCAC CAAATCCGGA TGCTGTGATG GGTGATGCAT TTGCAGTAAA AATCAGCCCG
ACTGGTCAGG TTCTGGAATA CTCTACATAT ATTTCAGGTT CCGGGCAGGA CTATGGAAAT
GGTATTGCGG TTGACGGTCA GGGCATGGCA TATATCACCG GAACAACAAG TTCAACAAAT
CTGCTCCCTA CCGGAGTCCC AGGGTATCAA AAATCCATCA AGGGAGGGCA GGATGCATTC
CTCTTTAAAA TGAACTTCCA GGCAGGCATT CCGCCAATCT ACGCGACTTA TCTGGGTGGA
TCAACCGGGT ATGACTATGG TGAAGCGGTT GCTGTTGACT CTGCAGGAAG TGCATATGTT
ACCGGAGCGA CAGCCTCTAC TGATTTCCCA GTCACGAATA TGGCATTACA GACGGTAAAG
GGGTGGCCAT ATGATGCATT TGAGAAAGAT GCATATGTAA CGAAATTTGG TTCTGATGGA
ACTGGCCTTA TCTATTCTAC CTATCTCGGA GGAAGTATGG ATGACTGGGG ATATGATATC
AAAGTTGATT CCTCATTCCG TGCGTTTGTC ACTGGTTATA GTCGCTCATC CCAGATCCCC
CGGAGTGGAC TCATCAATAC CATTAAACAG GCATCTGGTG GTCAGGACGG ATTCCTGACG
GTGATTAAGA GTGACGGCCG CTCTGCTGAG TCATCAACCC TGTTCGGAGG GTACCGCGAT
GATGTCAGCA GGGGTGTTGC GATATCTCCT GATGGAAATA CCAGTTTTGT TACCGGATAC
ACCAGTTCTC CAACAATGCT TAACCTGGTA TGCGGAAGCG ATTGTGAACG GGAAGCATTC
CCTGTGTACA AGTGGATTAA CCAGACGGTT TATGGTGACA GACTCTATAT TGGGGGGAAC
TTTAGTGGAG ATTTTCAGGG CAGCTTTGAT GCCTTTGTCA TGAAATTCGG ACAGCCATCA
CTTGTTCCTT CATTTAGTGC CAGCCCTGTT TGTGGGACGG GAGAGCCTAA TCTGACTGTA
ACTTTCACTG AAACGACAAC CGGTTCAGGA AATATTCTGA ACAGGATATG GAACTTTGGT
GATGGCACTC CGGTAAATGA TACCGGAGCA ATACCGATGG TGGTAAGCCA TAATTATACT
AGTCCAGGGA CGTACCAGGC AACCTTAACA CTCTATACAT ATACGAGTAT ACTCGTGAGC
GATCCGGTTA GTATTACCTT CTGTAATCCA TATACAAGTG CAAACTTCAC CGTAGCAGGG
TATAATAACA CAGCGGATCC GATTGATGTA CCTATAAACA CAGACATAAC TTTCAGTGGA
TATGCAGTGA ATTACACGCC CACTTCCTAT AATTGGCATT TCGCTGATGG TTCTGCAAAC
CAAACAGGGC AGACGACTCA TCACCTGTTC TCTCAGCAGG GAACATACAC GGTAAATATG
ACCGCTCCTT CGGGAACCTG TTGTGATAAT AATACGAATA TCGTCGGTTC AAAACGGATT
CGGGTTCTCG CTCCTCCGTT AGCAAGGTTT GTGAATAGTA CAACCACTCC ACGAATCGGG
TGTCTTCCAC TTACCGTGAC CTTTAATGAT ACTTCCCCTG TCGGTACAGT TGATTATGGG
GTTCCCACCG CATGGCAGTG GAATTTTGGC GATAACTCTT GGAATGGTAC TACCCAGAAC
GTAACCCATA CCTATCAGCA TGCTGGAACA TACACAGTTA GTCTGACAGC ATCAAATGCT
GCTGGTTCCA ATACGTACAC CCAGCCTGGT TATGTTCTGG TTAGTGGAAA TGTGACTGCC
GGGTTTACGG CTTCACCCAG AGCTGGCACA GCTCCACTGG GTGTTCAGTT TACTGATACC
TCTGCGGGAG TGCCAACATC CTGGGATTGG AGATTTGGTG ATGGTGGTTC GAATACCTCT
CAAAACCCCT ATCATGTATA TAACACCGCC GGGACATACA CGGTGAACCT TACCGTTACT
AATGATTGTG GTCATGTCGC GAGTGCGAAT TATACTGATT GGATAACCGT CAATGGAAAC
ATGACACCCA AAATATTATT TGGGAATAGC ACGTTTCCCC CGACATCAGA AAATCCGGTT
AATGGCACTC CGGTTCTTAA TGTCACGTTC CTTGGTAATA CCACTGATGG CACGCTGATT
GATTCAGCCG TATGGAGTTT TGGCGATTCG AATACAACAA CTCAGACCAG AGCAGCCGGG
TGGCCGGCTG ATAATACCTG GTTCAATACA TCACACAAAT ACTACACGGT CAGAGATTAC
ACGCCAGTGT TGCAGATTAC CAATACTACT TATGGTTCCG GAACAACTGG TGGGTTGTAT
ACCGACTGGA TAGGTGTATA CCCCCCGATC ATTGTGAACT TTAGTGCAAC CCCGCCCTCG
GGGATTGTCG GACAGAGTAT CCTGTTTACT GATCAATCTT CAGGTTCTCC AGTCAATTGG
AACTGGCATT TCACTGATGG CAGTCAGAAT GTCTCAGGGC TGTCATCTGT GAGTCATGTA
TTCAATTCTA CTGCAGTGTG GAATGTCATG TTGGAAGTCT GGAATAAGTA TGGGGCAACC
GGAATCGGGT ATCGGTATGT AAATATTACA TCTGCAGATT CATCTGGTCA GGTTTACTTC
ATTCCTCAAA ATATTACTCT TATTACTGAG GATCTCAACT ACCGGGTTCT GAATGTTGTT
TTAAGTAAAG CAGACTACGG GCTTTCTTCG TATACGATAA AAATCGATCT GAATAATTCA
GCACGGGCAC ATATCCGGAA CTGGGCAACA TCTCCATCAT GGGTAGATCA TTTCACGTAT
TCAGTAAGTC CGGCGTTTGA TTCGATTACC TTGTCAGGGT ATAAGGATAG TGGAATGCTT
CCAGCCGGTT CCAGAAATAT ATCATTAGGA AATATCAGTC TGACTGGAAT TTCTGCAGGA
GATGCAGATT TGAGGCTGAA TGGAACATCG ATTGCTCAGT ATGGTTCTTC TTTTATGTCT
TTGACAGGAG TCCCTGCTGA TATTCACGTA TATGCTGTCA GTCCTCTCCC TGGATACTCC
AATAAGCCTG CTGATATCTG GCCTCCTGGT GTGCATGACG GACTCATCGA TGACTTTGAC
GGCAACGGGG TTGTAAACAC CGCAGATGTT ACCGTGTTCT TTAACACCTG GGTTTCAGGA
GGATTTACCG GCATGCCGGT TCCGCCATTT GACTATAATC ACAACAACCG GATTGATACC
GATGATATTG TTGAGTATTT CAATCTCATC TGGTAA
|
|---|
| Protein sequence | MNRNISKGVL AALLCILLCC IVMADNQEIN YTDISAHPVQ FIENAGQAHE DILYQVKSSE
FSFDFTKDAL LVSGPSGDCE ECGENVTTPV IVTVADAEEN VTVEAFDKLD GYANFLIGKN
ESDWQQYVPW YGGIRYREIL PGIDLSYSGK QGVLKREFTV REGADPNAIR LIYGGNEGLS
LTEDGSLQVV TSFGNLTERS PYSYQIIEGN TIEVESSYQI FENGEVGYTI GEYDPAYPLI
IDPYLEYSTL LGGNLEDYGM DIARDSSGDV YVTGYTSSCN FPLRDPTVIN TAYLKFNGSY
CHNSRDAFIT KIGINQTTGN ASIIFSTYLG GDKADFGRGI AVDSLKNIYV TGDTFSEDFP
IMLPFAYGDR LHGSNDAFVI KLDPTGTIIR WSDYLGGNFA DQANDIALDS LNAVYLTGQT
VGNSPYKKLE QVFPTTPNAY QTAPNPDAVM GDAFAVKISP TGQVLEYSTY ISGSGQDYGN
GIAVDGQGMA YITGTTSSTN LLPTGVPGYQ KSIKGGQDAF LFKMNFQAGI PPIYATYLGG
STGYDYGEAV AVDSAGSAYV TGATASTDFP VTNMALQTVK GWPYDAFEKD AYVTKFGSDG
TGLIYSTYLG GSMDDWGYDI KVDSSFRAFV TGYSRSSQIP RSGLINTIKQ ASGGQDGFLT
VIKSDGRSAE SSTLFGGYRD DVSRGVAISP DGNTSFVTGY TSSPTMLNLV CGSDCEREAF
PVYKWINQTV YGDRLYIGGN FSGDFQGSFD AFVMKFGQPS LVPSFSASPV CGTGEPNLTV
TFTETTTGSG NILNRIWNFG DGTPVNDTGA IPMVVSHNYT SPGTYQATLT LYTYTSILVS
DPVSITFCNP YTSANFTVAG YNNTADPIDV PINTDITFSG YAVNYTPTSY NWHFADGSAN
QTGQTTHHLF SQQGTYTVNM TAPSGTCCDN NTNIVGSKRI RVLAPPLARF VNSTTTPRIG
CLPLTVTFND TSPVGTVDYG VPTAWQWNFG DNSWNGTTQN VTHTYQHAGT YTVSLTASNA
AGSNTYTQPG YVLVSGNVTA GFTASPRAGT APLGVQFTDT SAGVPTSWDW RFGDGGSNTS
QNPYHVYNTA GTYTVNLTVT NDCGHVASAN YTDWITVNGN MTPKILFGNS TFPPTSENPV
NGTPVLNVTF LGNTTDGTLI DSAVWSFGDS NTTTQTRAAG WPADNTWFNT SHKYYTVRDY
TPVLQITNTT YGSGTTGGLY TDWIGVYPPI IVNFSATPPS GIVGQSILFT DQSSGSPVNW
NWHFTDGSQN VSGLSSVSHV FNSTAVWNVM LEVWNKYGAT GIGYRYVNIT SADSSGQVYF
IPQNITLITE DLNYRVLNVV LSKADYGLSS YTIKIDLNNS ARAHIRNWAT SPSWVDHFTY
SVSPAFDSIT LSGYKDSGML PAGSRNISLG NISLTGISAG DADLRLNGTS IAQYGSSFMS
LTGVPADIHV YAVSPLPGYS NKPADIWPPG VHDGLIDDFD GNGVVNTADV TVFFNTWVSG
GFTGMPVPPF DYNHNNRIDT DDIVEYFNLI W
|
|---|
| |