Gene Mhun_2469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2469 
Symbol 
ID3923974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2741708 
End bp2742517 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID637898078 
Producthistidine kinase, HAMP region 
Protein accessionYP_503888 
Protein GI88603710 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.521658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGT GGTATCATAG TATCATTACA AAACTCACCG TTGCTTTTGT CATTCTGATT 
CTGGTTATTG CCGGTCTGAG TGTGCTCTAT ACATTCGGAG CGACAAAATC AGCTTTTAAA
GAGACTACGC AGGATGAACT GGTGGCTCTT GCCAGTGTTA TTGCAACCCA GATAGACGGG
GATATCCTTG CAGCGTTGCA ACCTGGTGAT GAGGTAACTC CTGAATTCAT CACAATGCGG
GATCAGCTCT ATGCGATGCA GACCTCAAGC CCTGAAATTT TATACCTCTA TACCATGAAA
CAGACCTCAG ATGGGATTGT TTTTGTGGTT GATGCAGAAT ATGGAATATC AGAAGATTCT
GCAGGTATTG GTGATGTATA TGATACTCCC ACAGAGGAGA TGAAGATGGG ATTCCAGATT
CCGGTTGCAG AACATGAGTA CACAACCGAT CAGTGGGGAA CCGTCATTTC AGGGTATGCC
CCGGTAAAGA ATGCAGCAGG AGAGGTCACC GGCATCGTTG GTGTTGACAT GAGTGCGACC
AGGGTCATCG AACGGCAGGA CTTTATCGGG AACATCATCT ACCTGATCAT GCTGATTGGT
ATTGGCATCA CCGCGGTCAT CATCGGGGTC ATCAGTAAGA CCATGATTCG GGATATAAGA
AGCCTGAATG ATTCTGCCGA AAAGATCTCC ACCGGTGATA TGAACGTTCT GGTGACGGTT
GAACGAAATG ATGAGATCGG GGAACTTGCC GGGTCATTTA GCAGGATGGT CTCAAGTCTT
AAGATCATGA TGATGGATGA TAGTCCCTAG
 
Protein sequence
MVQWYHSIIT KLTVAFVILI LVIAGLSVLY TFGATKSAFK ETTQDELVAL ASVIATQIDG 
DILAALQPGD EVTPEFITMR DQLYAMQTSS PEILYLYTMK QTSDGIVFVV DAEYGISEDS
AGIGDVYDTP TEEMKMGFQI PVAEHEYTTD QWGTVISGYA PVKNAAGEVT GIVGVDMSAT
RVIERQDFIG NIIYLIMLIG IGITAVIIGV ISKTMIRDIR SLNDSAEKIS TGDMNVLVTV
ERNDEIGELA GSFSRMVSSL KIMMMDDSP