| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2452 |
|---|
| Symbol | |
|---|
| ID | 3924229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 2725899 |
|---|
| End bp | 2727086 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637898062 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503872 |
|---|
| Protein GI | 88603694 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1641] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00299] conserved hypothetical protein TIGR00299 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.753623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTC TCGCATTTGA CCCCTTTCAC GGCGCTGCAG GGGATATGAT ATGTGGAGCT
CTCCTGAGCC TTGGTGCTGA CAAAGAGCAG GTCATGCGAG CGATGAGTTC TGTTGTGCAG
ACTCCAGATA GTGAGATAGT AAACAGGTGT GGCATTGCTG CCGTGAAGGT CCATACCCGT
GCCGGTCCTG CCCACCGGAC TCTCGAGGAA GTGCTGGATA TCGTCCGAAA GGCACATGCC
CCTCCGGCAG TAATTGCGCA GGCTGAACAC ATTTTTATCA GGATCGCAAA GGCAGAGGAG
GCAGTCCACG GAACGCACCA TGTTCATTTT CATGAAGTCG GCGCCGACGA TGCGATTGCC
GATGTTATCG GTTCCTGTAT GGCGGTACAT CTGCTTGCTC CTGAAAAAAT CATCTCCCTG
CCGGTTGCTG TCGGGACCGG GATGCTGACC TGTGCTCATG GGACCTTTCC TGTGCCGGCA
CCAGCAACCG CCGAGATCCT CTCATCCGGC AGACTTCTTG TAATGTCTGG AGAGCATACC
GGAGAACAAC TCACCCCCAC CGGGGCGGCA ATCCTCTCCG AGTTCTGTGG AGAGGGGACC
CCGTATCTTC CTGTCGGTAT CATTCTGAAG ACCGGATACG GGGCAGGCAG CAGGGATGAT
CCCCGATCTC CAAACGTGCT CAGGGCATAT GTGATGGAGT GCCAGGGCCT GTCAGAAGAC
AGGGTGGACA TCCTTGAGAC GAATGTTGAC GACATCACCG GCGAGTGCAT CGGAACCGTG
CTTTCACTTG TAATGAAAGA AGGGGCACGG GATGCCTGTG CAGTGCCGGT CCTCATGAAA
AAAGGACGGC CGGGGCATCT TATCAGGGTC ATCTCACCGG CTGAACGGTC AGGAGCGCTT
GCAGAGATAC TTGCCAGGGA ACTTGGGACA CTGGGTATCA GGGTTACCCC GGCTGTTCAC
CGGTTTATTG CCGAACGGGA GATACAGGAG GTACCGGTTC AGATACACGG GGAGGAGGTC
AGGTTTCCGG TAAAGTTCGG GTATATCGGA GATACCTGCT ACCTGGTAAA ACCAGAATAC
GGGGTTGCCG AGGAGTATGC AAAAACCCAC ACTATTCCGG TGAGGGATGT TCTCCATATC
GTGACGGAAG CGGGGAAAAA ATTCATCAGG TCAGGTGAGA GCCGATGA
|
|---|
| Protein sequence | MRLLAFDPFH GAAGDMICGA LLSLGADKEQ VMRAMSSVVQ TPDSEIVNRC GIAAVKVHTR
AGPAHRTLEE VLDIVRKAHA PPAVIAQAEH IFIRIAKAEE AVHGTHHVHF HEVGADDAIA
DVIGSCMAVH LLAPEKIISL PVAVGTGMLT CAHGTFPVPA PATAEILSSG RLLVMSGEHT
GEQLTPTGAA ILSEFCGEGT PYLPVGIILK TGYGAGSRDD PRSPNVLRAY VMECQGLSED
RVDILETNVD DITGECIGTV LSLVMKEGAR DACAVPVLMK KGRPGHLIRV ISPAERSGAL
AEILARELGT LGIRVTPAVH RFIAEREIQE VPVQIHGEEV RFPVKFGYIG DTCYLVKPEY
GVAEEYAKTH TIPVRDVLHI VTEAGKKFIR SGESR
|
|---|
| |