Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_2440 |
Symbol | |
ID | 3922428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 2705685 |
End bp | 2708813 |
Gene Length | 3129 bp |
Protein Length | 1042 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637898050 |
Product | PKD |
Protein accession | YP_503860 |
Protein GI | 88603682 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.120372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.562563 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGA TGTGGAGATA TGTACCAATT ATTCTGCTTA TTCTCCTCTG TGGTGGGGTC ACTGCACAGG AGATTGTGTT TTCTCCTACA GGGGGAACAG GAGAAGAGAT CCAGGCGGGG AATATATCAT TCAGTACCCC GGTGAGTGCA TCAAGCGGTA TTGCAATTCT TTCGGTTGCA CAAAACCCTG ATGAGTATAC CATCTCGAAT ACCGTGACGG TAGATACTAC CAGATTTGAT CTCTCCTCAG AGTCATGCGG GGGAGCTGAG AAGCAGATCA CGTTCGGAAA CCTGAACCAT ATTAACCCGA AAGTTTCTGA TGGAAGAGTT GTTTTTGAAG AATGGAATGC AGGTGTTTCC GGCATTGGTC TGTATGATAT ACAGTCAGGT GGGCTGTATC CGGTATATCC GGGGAAACTT CATCAGACCA ACCCGGATAT CTCTGGCAGA ATCGTCGTCT ATGAACAGGC CGGAGCAGGA TCAAACCAGG TAACCAACAT CAACGGGTAT GATCTGCAGA CCGACACTGC AGCGCCAATC TCTTCATCAA CTTCCAACCA GAACCAGCCG GTGGTATCTG GACGATATAT CGCATGGCAG GACTGGAGAA GTGGCAATCC TGATATCTAC ATGGCTGACC TGAATTCAGG AACCAGCCAG GCGGTAACAA AGGATCTTGC AGAACAGAAG AGACCTGACA TCTCCGGATC ATATATTATC TGGGAAGACT GGCGGAACGG TAATGCCGAC ATTTATCTGT ATGACATTAC CGCCGGGAAG GAGTACCAGC TGACAAATGA CCGATCTGAT CAGAGAAACC CACGGATTAG CGGGAAGATT GTTGTCTGGG AAGATAACCG GAATGGAATT TCTGATATCT ATGCCATGAC GCTGGATACC TTCCAGGAGT ACCAACTGAC CGATAGTAAG TATAAGGCAG TAAATCCTGA TGTTTCTGGT CCGCTTGTGG TGTGGGAGGA TTACCGGAAC GGAAACGCAG ATATCTACCT GCTTGACCTT ATTACCGGGT ATATCTACCA GGTAACAACC AACCAGGGAG ACCAGAAGAA TCCGTCGATC TATGGAAATC ATCTGGTCTG GCAGGATTAC CGGACTGGAA ACTCGAACAT ATTCCTGTAT ACCTTCTCAC AGGGAGTCGG ATCTGGGAAG TATCAGCTCT ATGGCTCTGC CACGATAAGC GGAAATGCAG CACCGGTCGG GACTGAAGTC AAGGCTCTGA TTGACGGGGT GGTCAGGGCA AAGACCACGG TGCAGCAGGC TGGAAGTTAT GGATCCTCCT ACGGACCGTT CCTTGAGATT CCGATTACCA GTGCAGATAC AGGCAAAACC ATCTCATTCA GACTGAACGA GTTCCAGGCA GATCAGGTCC TTACCGTCGG CACGGGCGGA GTTATGAGGC AGGATCTCTC TGCTTCATCG GTTCCACCCG TCCAGACATA TACCCTCTCC GGGAATGCAT TCGTAAACAG CATGCCCGCA CCGGTTGGAA CAATCATTAC CGCAACCATC GATTCCCAGA TCAGGGGACA GGTTACGGTT ACCACCGCGG GGTCCTATAC CGGCCTTGCA ATCCCGGTCA ATCAGAACGA CTCTGGAAAG ACGATCATCT TTACGGCAAC AACCAGCAGT TCATCTCTGC AGGCTTCCCA GAGTATTAGC GTCGGACAAC AGGTAGGTGG CTGGTTTGAC CTGACCTTTG GAACAACTCC CTCGCCGACT ACCTACCAGT TCAGCGGGTC AGTTCTGCTT GACGGGCAGT ATGCACCAGC AGGAACAGTC CTTTCCGCAG TCATTGACAA TCAGATCAGG GGGCAGACAA CCGTTACGAC AAACGGGCAG TACGGCACCC TGAACGTTCC GGTGTACCAG ACCGATAATG GGAAATATAT AACCTTTACC GCTCAGTTCA GCGGGGCTAC CTATGTTGCC GGACAACAGG TGACGGTCTC GGTCCCGCAG GGCGATCTCA TCATCGCATC CGCAGATGTC TCTTCCGCAA GTGGTCAGAT TATTCAGAAG AGACTTGACC TGACCTTCAT TGTGTCTGCC CAGTCCAGAT ATTCATTCTG GGGCCGGGCA ACCCTTGACG GAACACCTCT TGCTGCAGGA AATACCATCT ACGCCACTAT AGACAATCAG ATTCGGGGAC AGATAACTAC CCAGATCGCC GGTTCATACG GCTCTGAAAA CGGACCATAC CTTGAAGTGC CGATCACCAA TGCCGACATT GGAAAGACCA TCAGATTCCA GACAGCAACC GGGGCAGAGG GAGACCAGAG TCAGCTGGTT GTAAGTGGTC TGAAAGTCTT AAAGAACATT AACTTCGTCT CAAAACCTTC CAGTGCTGCT GATTTCACGG CAACTCCGAC CCAGGGGGCT ATTCCCCTTT CCGTCAAGTT CACAGACAAG TCATCAGGAA ACCCGAAATC CTGGTACTGG GACTTCGGCG ATGGAACAAC CTCTTCTGAA AGAAACCCGA CCCATGTATA TACCAGAAAC GGGGTCTATT CTGTCGGTCT GATGACAACC CTGTGGAACG GGCAGACAAA GAGCGTTGTA AAACAGAACC TTATTACCGC CGGAATAGTC AGCCCGCCAG AGGCACAGGT CACCCTGAAC CAGGGGTGGA ACTTCATCTC TGTACCAAAG ATGCTTGCAG ATGGACAAAA CTCCGCCAAA GCCCTCTTTG GTCATGTTGA TGTCGGCGGT CACAGTATCT TTGCATATAA TCCACGGACA AAATCCTGGA GCACCGTCAG TGCTAATACG GTTATCAATC CTCTTGATGC GGTCTGGATT TACTCAACCA AGAAAGATGC AATATACCTC TACTTTGCCG GTGACGCTCT TCAGATCCCA CCGACCAGAA AACTGGTCAA AGGATGGAAT ACCTTCGGAG TAACCAGCCT GAATACGGTT CCTGCACAGA ATGCCCTGCT TTCAGTCAGA GACCAGTGGA TCTATGTAAT CGGCTTTGAC TCCTCGATCC AGCGGTATCA GGGCACCATC ATGAACGTGC CGGAGAGTAA TGCCAATGTT CTGTATCCCG GATATGGATA CTGGATTTAT ATGAGTGAAG AGGGAGATCT TGCCGCTATC GGCATATAA
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Protein sequence | MMKMWRYVPI ILLILLCGGV TAQEIVFSPT GGTGEEIQAG NISFSTPVSA SSGIAILSVA QNPDEYTISN TVTVDTTRFD LSSESCGGAE KQITFGNLNH INPKVSDGRV VFEEWNAGVS GIGLYDIQSG GLYPVYPGKL HQTNPDISGR IVVYEQAGAG SNQVTNINGY DLQTDTAAPI SSSTSNQNQP VVSGRYIAWQ DWRSGNPDIY MADLNSGTSQ AVTKDLAEQK RPDISGSYII WEDWRNGNAD IYLYDITAGK EYQLTNDRSD QRNPRISGKI VVWEDNRNGI SDIYAMTLDT FQEYQLTDSK YKAVNPDVSG PLVVWEDYRN GNADIYLLDL ITGYIYQVTT NQGDQKNPSI YGNHLVWQDY RTGNSNIFLY TFSQGVGSGK YQLYGSATIS GNAAPVGTEV KALIDGVVRA KTTVQQAGSY GSSYGPFLEI PITSADTGKT ISFRLNEFQA DQVLTVGTGG VMRQDLSASS VPPVQTYTLS GNAFVNSMPA PVGTIITATI DSQIRGQVTV TTAGSYTGLA IPVNQNDSGK TIIFTATTSS SSLQASQSIS VGQQVGGWFD LTFGTTPSPT TYQFSGSVLL DGQYAPAGTV LSAVIDNQIR GQTTVTTNGQ YGTLNVPVYQ TDNGKYITFT AQFSGATYVA GQQVTVSVPQ GDLIIASADV SSASGQIIQK RLDLTFIVSA QSRYSFWGRA TLDGTPLAAG NTIYATIDNQ IRGQITTQIA GSYGSENGPY LEVPITNADI GKTIRFQTAT GAEGDQSQLV VSGLKVLKNI NFVSKPSSAA DFTATPTQGA IPLSVKFTDK SSGNPKSWYW DFGDGTTSSE RNPTHVYTRN GVYSVGLMTT LWNGQTKSVV KQNLITAGIV SPPEAQVTLN QGWNFISVPK MLADGQNSAK ALFGHVDVGG HSIFAYNPRT KSWSTVSANT VINPLDAVWI YSTKKDAIYL YFAGDALQIP PTRKLVKGWN TFGVTSLNTV PAQNALLSVR DQWIYVIGFD SSIQRYQGTI MNVPESNANV LYPGYGYWIY MSEEGDLAAI GI
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