Gene Mhun_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2427 
Symbol 
ID3922414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2679884 
End bp2686414 
Gene Length6531 bp 
Protein Length2176 aa 
Translation table11 
GC content44% 
IMG OID637898036 
ProductPKD 
Protein accessionYP_503847 
Protein GI88603669 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTA AAGATAGAGC TGTCTCGGAA GTCGTTGCAG CGATCCTCCT CATCAGTCTT 
GTTATCATAG GTATATCCAT CGTGTCAGTG ATGTTGACAT CAGGCCCGCC ACCGGAGGAT
ATCCCGAAAG TATCCGTGCA GATGATACCC AAAGATGAAG ATACATCAGG TGCAAATGCA
TCTTTTTACC ATGGTGGTGG CGATTCACTG AGGTTTTACG CAACCACATT TACAGATGAG
AAAGGAAACC CAATAGATCT GAATAATGTC TATCTTGTTA AGTGGAATGT CACGTCAGGA
GAAAAGGATT ATGAAGTCAG GTGGAAAGAT CATCCTGACC TGGAATGGAA TTATTCATCG
GTTGTAAATA TTACTGAAAT TAATGATGGA TATCAGATAC ACCATAATGT ATCTACAGGG
AATTACCTGA TAAAAGAGTT CGGAACTGGA CACAGCAGAC CGATTGAAAT CCCAAACGTT
ACGGCAGTTC CAACCATTGT TCCCATTCCT GGCTTTTGTA ATGATACCCC ATCTGCAGCG
TTTACTGCAG ATACTGTCGG CGATTATCGA AATAATCTTA CCTGTATTGC ATCCGCTCAT
GCAGATAATC TAACTCACAA ATGGACAATA TCAGGTAAAA ATTTTCTACC AGTATCTATT
TCAACTAAAG AATGGAGTTT TGATTATACC CTCCCTATTC CCTACGATAC AAACAGTCAG
GGTTATTTCA TTCAGCATAC GGTGTATAAT TCAACCCCCA TCTGCAGTGA TTCTTCTATT
CAGTATGTAA CTGTCCCTCC CTGTTCACAT GCCCCCTGTG TTGCCGGGTT TAGTTATCTT
GTTGATGGGA AAACTGTTCA ATTTACCGCT GATGGCCCAG ATAAGGGGTT TTTTTCTTGG
GAATATGGAG ATGGGCAAAA TAAAACGATA ATAAATAATA CAAAAGTAGA GCACACCTAC
CTGGATAATA AATCAATTCA TTCGGTAACA TTAACGAAAA AGATAAATCG ATGTGACCAG
GATTTCACCT GTTCGGTGAC ACAGAAGGTC ACAACAGAAT CGATTGTGTG CGGGTGTTTC
ATAGATAACT ATGATCCATC CACACGAAAC CCATGGAATG TTGAATTTAC ATGGAATCAT
CCAGATGTAT GTAAAGGTCT GGATAACAAG GACTGGAAAG TAAAGTTTGA CTTTGGTGAT
GGCAGTAACT CAGAAACCTA TTCAAAAGAC GGATTTGCAG GAATAACTAA ATGGCCAGAT
TCTAATCGGA TCTCTCATTC TTACACCGAG TGTCGCGATT ACAGTGTAAA AATGGATGTC
ATCGATCTCC ATGGTGGTAT CTACTACACC TGTACAAAAA CAGTTAATCT CCCCTGTATC
TGCACAGAAG AAGAAAACCC AACTCCGGTA TTTACTGCCA CAGAAATAAA GTCAAATAAT
ACGACCACGA TCATCAATGA TACCTCTACA CCATCGGACA TTATTCAATG GACATATGAC
TTTGGAGATG GCACGACACC CATAAATTTC AACACCACGA CAAAACCAGA TCCTTTCATA
TTTACACATA CCTATTCATC ATGTGGAAGT TATGTCATCA AACTCATCGT CCATGATGCT
ATGGGATGCT GGGCTGAAAC TACCCGGACC ATCTCGTGCG GTGGAGGTAA TTGTGAACCC
GACGATATAC GGGCTGAATT TTCTGCAACT GCCGCTCCAA ATAACCCGAA ACGGTTCAAC
TTCATTGACT CGTCTTATTC AAACAATAAC ACGCTGACCC GTTGGGAATG GGACTTTGGT
GATGGGACAT CTGCGATAAA TACCTCTCCA CCAGGAACAT TCTGGATTGA GTATGACAAA
TGTGGCTCAT TCCCGGTAAA ACTCAGGGTA TGGGATGATA TCGGCTGCTG GGATGACGTC
ATTAAGGAAG TCTCTTGTAA TTGCCCAAAA CCGATTGCAC AATTCACCGT CGAATCTATG
TCCAACCCCC GTGAGTTCAG GTTCACCAGT ACATCAACCC ATGATCCTTC AGTCACAATC
ACAGACTGGG AATGGGACTT TGGTGATGGT GTTACTTCGA CAGGCTCCAG CGTTACTCAT
CGGTATACTA GTCCAGGAAC CTACACGGTC AGGTTACGAG TAACAACGAA TTGTGGATCA
TGGGATCACA CCTTCCAGGA TATCACAACT GGCTGTCCGT CCCCGAAAGC AGCCTTTGAG
TATAATAATA CAACCAATCC CCAGCAGTTT GTGTTCACCG ATCGTTCTAC CCATGAACCG
TTTGTGAATA TATCATGGTT GTGGGAGTTT GGAGATGGCA CAAACTCAAC AGAGCAGAAC
CCCACCCACA CCTTCCCAAG TTGCAGCCAA TATACAGTTC GACTGAAGGT GACGGCTGAT
TGCGGGAGTA GTAATGAGAC GATTCAGAAT GTCATATGCG GCTGTCCGTC CCCGAAAGCA
GCCTTTGAGT ATACTACTTC GGCAAATCCT CAGGAATTTG TGTTCATAGA TCGTTCCACC
CATGATCCTT CTGTGAATCT ATCGTGGCTG TGGGAGTTTG GAGATGGTAC AACCTCAACG
GAGCAGAACC CCACTCACAT ATACCCAAGT TGCAGCCAAT ATACAGTTCG ACTGAAGGTG
ACGGCTGATT GCGGGAGTAG TAATGAGACG ATTCAGAATG TCATATGCGG CTGTCCGTCC
CCGAAAGCAG CCTTTGAGTA TACTACTTCG GCCAATCCTC AGGAGTTTGT GTTCATAGAT
CGTTCCACCC ATGTTCCTCA TGTGAATCTA TCGTGGTTGT GGGAGTTTGG AGATGGTACA
ACCTCAACAG AGCAGAACCC GACCCACACC TACCCAAGTT GCAGCCAATA TACAGTCCGA
CTGAAGGTGA CCGCTGATTG TGGAAGTAGT AATGACACCA TACAGGATAT CGTCTGTGGA
TGTCCGCCCC CGGTTCCTGA CTTTGATTAC AAATGCATTG GAGAACGAAC TGTCAACTTT
ACCGACCTAT CCAGAGGAAT GGGCAATGGA ATTAGGGCTT GGTACTGGGA GTTTGGAGAT
TTGAGGCAAG ACAATATATC CGGACTACAA AACCCAACGC ATGAGTATGA CAATCCGGGG
ACCTATCCGG TCAATTTAAC GGTATTCACC ACCTGCAATT CATCAGCCCG GTGGACACGA
GAGGTAACCG TCCCCTGCTG CCAGATGCCA GTTCCTGACT TTACCTACAC CTGTCTTGAG
GATGGGAATA CCATCCAGTT CAATGATACC TCGAAGGTAT TCGGAGATGC AATAACCCGT
TGGAGATGGG ACTTTGGTGA TAATGCGGGC ATATCGTCAG ACAAGAACCC CGTCTATCGG
TACAACCAGC CAGGAACCTA CCTGGTTAAC CTCACCATAA CGACGACATG TGGTGCTCAA
AACTCATGGA TTCATAATAT TACCGTCCCC TGTCTCTGTT CCCCGCCAAT TGCTAACTTC
ACGAAGGAGA TGGTCTCCTC AAAGCCCTTC ACCATGAGAT TTACCGATCA GTCGGTTCCG
AACAGCAATT CAATCACATC ATGGAACTGG TCATTTGGTG ATGGTACAAC TTACTCCGGT
CAGAATCCCC CGGAAAAGAC CTATAATTCC TGTGGTGAGT ATCTGGTAAA TCTCCGGGTA
ACGAATGACT GTGGTCAGTA CGATGACGTG GATCAGCTCG TATGCTGCCC GGTATTTGCA
AACTTTACCT ACCAGCTGGA TCCCCCTGAC GGAGATGCTC CGGTAACGGC CTATTTCACT
GATCTGACAG AGGGAGAGCC GAATGCATGG CACTGGGACT TTGGAGACGG GAAAACGTCA
TATCTCCAAA ACCCGGTACA TATCTACAAT GAAGGAGGGA ATTACACCGT CACTCTCCAT
GCAACCAGTC CCTGTGGCGG GAATGAAACA CATAGTAAAA TCTTAACCTT TGGATGTCCG
GAAGTCGTTG CAGACTTTAG TTATACCATC ATCTCAGAGG ATCCGTTCAA TGTCTCATTC
AGGGATCTCT CCTATGGTGG TGAGATTGTA GACTGGACCT GGTTCTTTGG TGACGGGACG
ACATCAAAAG AGCAGCATCC CTACCACCTC TATGCCGGAA GAGAGAATTA CAACGTTGGT
CTGATTGTAA AGAATAGTTG TGGTAATACT GCACAGATAT GGCGGCGTAT TGCCTTTGAC
TGCCCGAACC TGACCGCAGA TTTTAATCTC ACTCCTTCGT CCGGAATGAG TCCTCTTGAG
GTGAAGTTCA CGGACAACTC AACACCAATG GATAAGATCA TGAGCTGGCT TTGGTTCTTT
GGAGATGGAA CCAGTTATTA TACGACCAGC CCCCCCTCCA GAAACCCGCC AAACCATACC
TATTCCAAGA TTGGGACGTA TTATGTGACA CTTCAGGTTA AGAACGAGTG TGGTAATCCG
TATAGCACGG TAAAAACGGT GAATGTCACA AACCCTGCAA GTATCAGTGG GTATCTCTGG
AATGATAAGA ATTTGAACGG TGTCCGGGAT CCTGAAGAAC AGGGGCTTTC GAACTGGCAG
GTTTATCTAC AAGAGCGGGT GGCAGGAAAT TGGGTAGATC GGCAGTCAAA TTCTACAGAT
ATAAATGGAG ATTATACATT TAATCTTCCT GATGTGACCT ATGGAACGTT CAGAATACGT
GAAGTGTTAC CTGCTAACTG GAAAGTAACG TATTCCTATG GTTCAGGGGC AGAAACGTAC
TCATCGGCCC TGGTAATCTC CACACAACGG CAATACAATG AGGTTCATTT TGGAAATGCA
CAATGGAGAG TTTCTGAGAT ACAGATTCCG TCACGATGGA GATATGGGTC CAGCTATCCG
GGATCACGGG GTAATTATCC GAAAAATTGG CCATTTGATT ATACAACATC ATTTGATTCA
ACACCTATGA AGTCATGGCC ACAGGATGGA ACGGGTAATG GGGCATTTAT CCCCTATATT
CGATATGAAA ATTGGGGGGA TAGTAGTTTT ATTTTGCATC CTGGATTTTA CAACCTTTAT
TATAAAACGG GATCTGCATG GTATTGGCTA ACCACGTGGC ATTGGAGAGC AAATGGCTCC
GTATTTAACA CGGGATTTAA TTGTTCAGTA CCGGATAACA CGATATATCG ATATTCAGAT
ATTGATCTCT TCTATCTCCG TAACTATTCG ACATTTTTTG AATTTTACTA CCCACGAGAG
AATGAGCTTA TTCCTTATAA TACGAGTTCA TATGTTGAAG TCCATTATGT CGGGCCAAAT
GAGAATCAGG CGAATGGAAA TACGAATTGT AAACTCCATC TTCCAGATGG GATGATTGTG
AATCTTCCTT ATATTGGATA TCTTGGGTAT AATACCGGTT ATTGGAATAA TACGAAATGG
GAGGGTCAGT ACATTACTCT CGTAGCGAGA AATCTTCTCA CGAATGGAGC TACAGTTACC
ACCTATCGAA ATGTCTCTGT TGATTTTGAG CCTGTTACGC CTGTTATTAT ATCACCGGTA
AATAATTCTG TGGTAAAGGG ATTGACGACT TTTACTGCGA CAGTAGGTGG AAAAAACCGT
AATACGAGTG ATGTATGGTT ATTGATCGAT GATCAGAATG CTGGCCAGAT GGTCTTTGAT
GCACTGAATA ATAGGTTTAA CCTACAGGTG AATGTTGAAT CATATGCCGG AAAGACCATC
TCTGTGGTAA CACGGGCTTA TCCTCTCCCA GGAAAAGGAA CATTTCGTGA TTCAAGTCCA
GTATGGTTAA GAGTGGGAAG CGAAGAGCCC ATACTGGCAA ACTTTACTGC TGATCCCTGG
GAAGGGCCTG CACCTCTCGA GGTTTCCTTT ACCGATACCT CCACTGGCGG CCCTGCGTCA
TGGACCTGGA ACTTTAATGA CGGATATACA TCCACTCTAC AAAACCCAAT TCATATCTTC
CAAAATCCTG GTAATTATTC AGTCTCCCTA CAGGTAACAA ATGTCACAGG TCAGTCAAGC
ACCATCAGTA AATACATTAA TACCACTGGA GTATTAAACA CCGTCAGCCT TCTGACAAAC
AGGAACGGGT ACCTGCATCC AGGGTATGCA AGCTGGCTCG TCAGAGGAAG CGGATCTACA
ATTACCGTGA ATGGAACGGA GTACACACTC AATAATGGAG ACCGGGTCAG GTTGGATATT
GGAGTTGCCC AGACTCGTGC AAATATCAGA ATAGTGGGAG AGATAAATGC ATTCAATGTT
ACCAGTGTAA TACTCTCCAT TAATGGGAAC CCTGTAGATA CTGGTGTTTG CAGTGCGATA
AAAATAAATG ATTTCGAGAA TTATCACTCA AATCTCAAAA TTACTGCATA CCGACAGACC
AATGCCTGGA TTAATTTAGT CTGGAATGGT GTCCCAATAT CGGTCCAGAA TTATCAGAAC
CTTGAAATTT CGGAATTAAT GCCGTCTACG GATAAGATCA TGGAGTTGTC ACTCGAGCCT
GGAAATATCT ACTTTGACGG TCGTGCTTCA TCATACCGGC TTTATTCATG A
 
Protein sequence
MNSKDRAVSE VVAAILLISL VIIGISIVSV MLTSGPPPED IPKVSVQMIP KDEDTSGANA 
SFYHGGGDSL RFYATTFTDE KGNPIDLNNV YLVKWNVTSG EKDYEVRWKD HPDLEWNYSS
VVNITEINDG YQIHHNVSTG NYLIKEFGTG HSRPIEIPNV TAVPTIVPIP GFCNDTPSAA
FTADTVGDYR NNLTCIASAH ADNLTHKWTI SGKNFLPVSI STKEWSFDYT LPIPYDTNSQ
GYFIQHTVYN STPICSDSSI QYVTVPPCSH APCVAGFSYL VDGKTVQFTA DGPDKGFFSW
EYGDGQNKTI INNTKVEHTY LDNKSIHSVT LTKKINRCDQ DFTCSVTQKV TTESIVCGCF
IDNYDPSTRN PWNVEFTWNH PDVCKGLDNK DWKVKFDFGD GSNSETYSKD GFAGITKWPD
SNRISHSYTE CRDYSVKMDV IDLHGGIYYT CTKTVNLPCI CTEEENPTPV FTATEIKSNN
TTTIINDTST PSDIIQWTYD FGDGTTPINF NTTTKPDPFI FTHTYSSCGS YVIKLIVHDA
MGCWAETTRT ISCGGGNCEP DDIRAEFSAT AAPNNPKRFN FIDSSYSNNN TLTRWEWDFG
DGTSAINTSP PGTFWIEYDK CGSFPVKLRV WDDIGCWDDV IKEVSCNCPK PIAQFTVESM
SNPREFRFTS TSTHDPSVTI TDWEWDFGDG VTSTGSSVTH RYTSPGTYTV RLRVTTNCGS
WDHTFQDITT GCPSPKAAFE YNNTTNPQQF VFTDRSTHEP FVNISWLWEF GDGTNSTEQN
PTHTFPSCSQ YTVRLKVTAD CGSSNETIQN VICGCPSPKA AFEYTTSANP QEFVFIDRST
HDPSVNLSWL WEFGDGTTST EQNPTHIYPS CSQYTVRLKV TADCGSSNET IQNVICGCPS
PKAAFEYTTS ANPQEFVFID RSTHVPHVNL SWLWEFGDGT TSTEQNPTHT YPSCSQYTVR
LKVTADCGSS NDTIQDIVCG CPPPVPDFDY KCIGERTVNF TDLSRGMGNG IRAWYWEFGD
LRQDNISGLQ NPTHEYDNPG TYPVNLTVFT TCNSSARWTR EVTVPCCQMP VPDFTYTCLE
DGNTIQFNDT SKVFGDAITR WRWDFGDNAG ISSDKNPVYR YNQPGTYLVN LTITTTCGAQ
NSWIHNITVP CLCSPPIANF TKEMVSSKPF TMRFTDQSVP NSNSITSWNW SFGDGTTYSG
QNPPEKTYNS CGEYLVNLRV TNDCGQYDDV DQLVCCPVFA NFTYQLDPPD GDAPVTAYFT
DLTEGEPNAW HWDFGDGKTS YLQNPVHIYN EGGNYTVTLH ATSPCGGNET HSKILTFGCP
EVVADFSYTI ISEDPFNVSF RDLSYGGEIV DWTWFFGDGT TSKEQHPYHL YAGRENYNVG
LIVKNSCGNT AQIWRRIAFD CPNLTADFNL TPSSGMSPLE VKFTDNSTPM DKIMSWLWFF
GDGTSYYTTS PPSRNPPNHT YSKIGTYYVT LQVKNECGNP YSTVKTVNVT NPASISGYLW
NDKNLNGVRD PEEQGLSNWQ VYLQERVAGN WVDRQSNSTD INGDYTFNLP DVTYGTFRIR
EVLPANWKVT YSYGSGAETY SSALVISTQR QYNEVHFGNA QWRVSEIQIP SRWRYGSSYP
GSRGNYPKNW PFDYTTSFDS TPMKSWPQDG TGNGAFIPYI RYENWGDSSF ILHPGFYNLY
YKTGSAWYWL TTWHWRANGS VFNTGFNCSV PDNTIYRYSD IDLFYLRNYS TFFEFYYPRE
NELIPYNTSS YVEVHYVGPN ENQANGNTNC KLHLPDGMIV NLPYIGYLGY NTGYWNNTKW
EGQYITLVAR NLLTNGATVT TYRNVSVDFE PVTPVIISPV NNSVVKGLTT FTATVGGKNR
NTSDVWLLID DQNAGQMVFD ALNNRFNLQV NVESYAGKTI SVVTRAYPLP GKGTFRDSSP
VWLRVGSEEP ILANFTADPW EGPAPLEVSF TDTSTGGPAS WTWNFNDGYT STLQNPIHIF
QNPGNYSVSL QVTNVTGQSS TISKYINTTG VLNTVSLLTN RNGYLHPGYA SWLVRGSGST
ITVNGTEYTL NNGDRVRLDI GVAQTRANIR IVGEINAFNV TSVILSINGN PVDTGVCSAI
KINDFENYHS NLKITAYRQT NAWINLVWNG VPISVQNYQN LEISELMPST DKIMELSLEP
GNIYFDGRAS SYRLYS