| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2415 |
|---|
| Symbol | |
|---|
| ID | 3922402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2663675 |
|---|
| End bp | 2665348 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898025 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_503836 |
|---|
| Protein GI | 88603658 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA GCAAACATAT CGAAAAAAAA TACCTCTTTC TTCTGGTATT GGTCATGCTC
TTGATTGGAT TTGGATCATC AGATGATCCA GCCATCGGGA TCAAGCAATC AGCCCTCTCA
CACGGGACTG CAGTACAGGA TGGAGAACTC GAAGCAGTTG GTGAGGTTAT TGGATCAGGA
GGATGTACCG GGACACTCAT TGCAGACAAT CTCGTCCTTT CTGCAGCACA TTGCTTCTGT
AATGGAAAGA GTAATTGTGT GAATCAGGGG CAGTTCATCC TCCGGAATGT CCGGACAGTA
GCAGATCCCA ATAACCGCAG AAATGTTACC TTCACCGGAA AAGTAAGAAT ATTTCCGGAG
TATGAAGATC GGGGATGGCA ACGGGAAGAC TATGGAGTTC TTGAACTCAA TTCCCCAGCA
TCCTCACAGG TACTGGTAAC CCCCATACCG GTTGAAGATC CCTGGAATAT TCCCCTTGTC
GGTGAAACCC TCACACTTGT CGGATTTGGA ATGACTGGAG ACAAGTGCGC ATTACCAGGA
CAGGGAAAGA TGAAGATAGC TCTTCCGGTA GACGAAAGCG GATGGGGCGG TATCAGCTTT
AAGAACAACC GGTTATATTC CTGTCCAGGT GACTCAGGCG GGCCGATTCT CAATAAAGCA
GGTCACGTGG TTGGCGTGGC ATCATGGGGT GACAATCAGG TGAGCGTTTA CCGTCCGACT
TCATATGCCT ACAACTGGAT TTTTGGTATC GGCACTCCAA AGTGGAGATT ATGTGAATGG
GTTCCGGTTG AAACAGGCGG TAAGAACAGC CATGAAAAAG TCCAGATCTG CCCGGACGGG
AGTTATCTGA CCGCTCTTGA CCTGGATGGT GATCAATCCG TCAGCGACTT TGATACTCCT
CTTATAGGCC AGGCACGATG CTGCAGGATA GAGGGAAAAG AGCAGGAGAA ATGGGCGGAG
AGTCAATGGG TTCCGGTTGA GCAGAAAGGC CTTTCTAGTC ATAGTATGAG CGGTTCCTGG
TGCCCGCAGG GGTCCTATAT CACCGGGATA GATCTTGACT CATGTTCTGG ATGCGATCCT
CTTGATTCAC CGGTCATCGG GGCGGTTCAG TGCTCAAAGC CATCCGGAAA CGGATTATGG
GGCTCAACCT ACTGGATGGA TGTCGGTCCT GAAAAAAGTC ATCAGAAACA GGATTGGTGC
TTTGAGGGAG CATACATTAC CCAGCTGGAT CTCGACCGTG ACGGGGAGAG TGATCCTCAT
GATTCACCGG TTGTTGGAAA AGCGAAATGC AGTTGTTCAC GGGCAGCATT CTCTCCTGCG
GTCATCCAGA TGATTGCAAC GCCTTTTATT GCTGCAATTC AGACCCTGGA CCCTATGGAT
ATGAATATAC CCGAAATGGT TCCTATCGGG CCGGAGGATA TCGCCCTGAC TCCGTCGAAG
ACTGATATGG AACCAGACAC CAATCGGCCG GGAGAAGATT ATACCGTGTT TGACCTTTCC
TCACCTGATC CCGAGGCTTG TGCGAACGCC TGCAGGGAAG ATGAGAAGTG CATGGCATAT
TCGTATGTGA AACCCGGGTT TCAAAGTGAA AAAGCACGAT GCTGGTTAAA GTCCGGTATT
CCTGATGCAG AGCCGGATGA GTGCTGTGTA TCCGGAATCA TCAGAACCCC GTAA
|
|---|
| Protein sequence | MNKSKHIEKK YLFLLVLVML LIGFGSSDDP AIGIKQSALS HGTAVQDGEL EAVGEVIGSG
GCTGTLIADN LVLSAAHCFC NGKSNCVNQG QFILRNVRTV ADPNNRRNVT FTGKVRIFPE
YEDRGWQRED YGVLELNSPA SSQVLVTPIP VEDPWNIPLV GETLTLVGFG MTGDKCALPG
QGKMKIALPV DESGWGGISF KNNRLYSCPG DSGGPILNKA GHVVGVASWG DNQVSVYRPT
SYAYNWIFGI GTPKWRLCEW VPVETGGKNS HEKVQICPDG SYLTALDLDG DQSVSDFDTP
LIGQARCCRI EGKEQEKWAE SQWVPVEQKG LSSHSMSGSW CPQGSYITGI DLDSCSGCDP
LDSPVIGAVQ CSKPSGNGLW GSTYWMDVGP EKSHQKQDWC FEGAYITQLD LDRDGESDPH
DSPVVGKAKC SCSRAAFSPA VIQMIATPFI AAIQTLDPMD MNIPEMVPIG PEDIALTPSK
TDMEPDTNRP GEDYTVFDLS SPDPEACANA CREDEKCMAY SYVKPGFQSE KARCWLKSGI
PDAEPDECCV SGIIRTP
|
|---|
| |