| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2392 |
|---|
| Symbol | |
|---|
| ID | 3923290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2641568 |
|---|
| End bp | 2643418 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898002 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_503813 |
|---|
| Protein GI | 88603635 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.971604 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATG ATCTGACCCG GCGGGTTGAT CAGGAATGTG TTGTCAGGCA GGTTTCCCGC
TCTGACTGGA TCAATGAGGC ATGTACCCGG CAGCTTCGAA AGCTCTCCGG GTATGGTATA
TATCCGTGTG GGAATTCAAG CCCGATCATT GATGACTCCC CGGCACCGCA CCGGCATAAT
ATGCAGAACT ATGATGAAAC CTACCGGAAT TTCCGGATAG AGGTTCCGGA GTATTTTAAC
TTCGGGTTTG ATGTCGTCGA TGCGTGGGCA AAAAAGGACC GGAACAAATT AGCAATGGTC
TGGACCAACC AGGAGGGAGA AGAGAAGTTC TTTACATTCC GCGACATCTC ACGCAGGTCT
AACGAGATCG TCAACATGAT GATCAAGTAC AAAATCGGTA AGGGAGACCG GGTCCTTATC
ATGCTCCACC GAGTGCCTGA GTGGTGGTTC ATGGTAATCG CCCTTATCAA GATCGGTGCA
GTGTACATCC CGGCTCCTAC CATGCTGACC CCGAAGGATC TGGCATACCG GATCAAAACG
TCAGAGGCAA AGATGGTCAT CACCGATATG GAGAACGCCC ATAAGGTTGA GGAGATTGCC
AGTATTTGCC CGACACTTGA GACAAAGATG GTTGTGGATG GTGCACGTGA TGGATGGCTT
TCATATCCGC GTGAACTGAC CTATCCTGCA CCGGTTTCCT CACGAATTAT CAACCTGAAG
GGGATGAGAA AGACAAAGGC GACCGATCCG ATGGTTATTT TCTTCTCATC CGGCACAACC
GGTGAACCAA AGATGGTGCT GCATTCTCAG GCATATCCGC TTGGTCATAT CGTCACCGCC
CGGTTCTGGC ATGATGTGCG TAATAATGAT CTGCACTTTA CCGTTTCAGA TACCGGGTGG
GCAAAATCTG CTTGGGGGAA ACTGTTCGGA CAGTGGATTG AGGGTGCTGC AATCTTTGTT
TATGACTACC GGAACAAGTT TAATGCAACC GAACTTCTCC CGCTTATTGA AAAGTACGGG
ATAACCACTT TTTGTGCACC GCCGACCATC TACCGGATGC TGATTATGGC TGATCTCCGC
AAGTATGACT TTTCTGAGCT CAGGCATTGT GTAAGTGCCG GGGAACTCAT CAACCCTGAA
GTCATTAAGG CATGGAAAGA TGCAACCGGC CTTGAAATAT ACGAAGGATA TGGGCAGACC
GAGACGGTTT TGTGTGTCGG GACATTCCCA TGCATGGAAC CGAAGTACGG GTCGATGGGA
AAACCCTCTC CGGGCTGGGT GATCGAACTT CATGATGAGG ACGGAAAACC GGTCAAGCCA
GGGGAAGAAG GATCCATCGC AATCAAAACC GATCCCCGTC CGGTCGGGTT CTTCATGGAA
TACTGGGGGA ATGAAGAAGC AAACGCAAAT GCATTCAGAG ACGGGTTTTA CTATACCGGT
GACCGGGCGG TCAGGGATGG TGATGGGTAC TTCTGGTTTG TAGGCCGTGA TGATGATGTC
ATCAAAGCGT CAGGGTATCG TATCGGGCCA TTTGAGGTTG AAAGTGCAAT TATTGAGCAC
CAGGCCGTGC AAGAGGCTGC GGTTGTCGGG TCACCTGATA TCATCCGGGG ATTTGTTGTG
AAAGCGTTCA TCGTTCTGAA AGCCGGTTAT GAACCCTCTG AAAAACTGGC ACGGGAGATT
CAGGAGTACG TCAAGTCTAT CACGGCTCCC TATAAATATC CACGAAAGAT TGAATTTGTA
AAAGAACTTC CAAAAACCAT TTCAGGTAAG ATCAAACGAA AGGATCTCAG GGAGATGGAG
ATGAAACGGT TCGAAGAAGA ACAGAAGAAC GGTCGCGGTG ATCATTCATA G
|
|---|
| Protein sequence | MDDDLTRRVD QECVVRQVSR SDWINEACTR QLRKLSGYGI YPCGNSSPII DDSPAPHRHN
MQNYDETYRN FRIEVPEYFN FGFDVVDAWA KKDRNKLAMV WTNQEGEEKF FTFRDISRRS
NEIVNMMIKY KIGKGDRVLI MLHRVPEWWF MVIALIKIGA VYIPAPTMLT PKDLAYRIKT
SEAKMVITDM ENAHKVEEIA SICPTLETKM VVDGARDGWL SYPRELTYPA PVSSRIINLK
GMRKTKATDP MVIFFSSGTT GEPKMVLHSQ AYPLGHIVTA RFWHDVRNND LHFTVSDTGW
AKSAWGKLFG QWIEGAAIFV YDYRNKFNAT ELLPLIEKYG ITTFCAPPTI YRMLIMADLR
KYDFSELRHC VSAGELINPE VIKAWKDATG LEIYEGYGQT ETVLCVGTFP CMEPKYGSMG
KPSPGWVIEL HDEDGKPVKP GEEGSIAIKT DPRPVGFFME YWGNEEANAN AFRDGFYYTG
DRAVRDGDGY FWFVGRDDDV IKASGYRIGP FEVESAIIEH QAVQEAAVVG SPDIIRGFVV
KAFIVLKAGY EPSEKLAREI QEYVKSITAP YKYPRKIEFV KELPKTISGK IKRKDLREME
MKRFEEEQKN GRGDHS
|
|---|
| |