Gene Mhun_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_2358 
Symbol 
ID3923295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2609811 
End bp2611580 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content53% 
IMG OID637897970 
Productthiamine pyrophosphate enzyme-like TPP-binding 
Protein accessionYP_503781 
Protein GI88603603 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID[TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTTC AATATCTCCT GGGAAATGAG GCGATTGCAC ATGGATGCCT TGAAGCAGCC 
GTCGATGTCG CCTGTGGATA TCCGGGTACT CCCTCTTCTG AGGTGATTGA TACCCTGCGG
ATGGACCCTG ACCGCGCCTG TAAGGTCGAA TGGTCAGTAA ATGAGAAAGT AGCGTTCGAA
GAGGCACTTG CTGTTTCATG GTGTGGCCTT CGGGCTATCT GTACGATGAA ACATGTCGGC
CTCAATGTCG CTGCCGATCC CTTGATGACC TCGGCGTATA CGGGGACAAA AGGCGGATTT
GTCATCATGA GCGCTGACGA TCCCTATGCC CATTCGTCAC AGAATGAACA GGACAGCAGG
TGTTATGCCA AATTTGCACG GATACCCTGC CTGGACCCCT CTACATTGCA GGAGGCTCAT
GACATGGTTC GGGATGCTTT CGCCCTCTCT GAAGAGTTCT CACTCCCGGT CATGTTCCGC
CCGACGACCC GGATTTGTCA TTCGAAAAGT GATGTAAATC TGGGTGATGT CGTGGTTTCT
GAACGGACCG CATCATTTGA AAAAAATGCC AGGCAGTATG TGGTCATTCC CGCGCATACC
AGGATCCTTC ACCAGAAGCT GAACAAGAAA CAGCACGCAC TCAAGAAAAG GCTCGTAGAA
CTCGGGTACA ACCGGTATGA GGTGAAAGGG AAGAAAGCAG TCATCTGTGG CGGAGTCGGG
GCATCCTATG TCAGGGAGGT TATCGGTCCG GATGTGTCTG TCGCGATAAT CGGTGCATAT
CCAATTGATG AGGATTGGCT CAGGGAGTTT ATCAGTCATC ATAAGGAGGT GATGGTGATC
GAAGAACTCT CACCGGTCAT CGAAGAGGTC GCACGACAGG TCAGTGGAAC CATTCCGGTG
TTTGGGAAGA TGACCGGTCA TGTACCGTAC GAAGGTGAGC TTGCTCCTGA CCGGGTTGCA
GGGTACCTGA AGGCTGCGGG TTTTGCCGTA TCGGTCACCT ATCAACCGGC AGCAACCCCA
GCCGCCCTTC CGGTACGACC GCCCATTCTG TGTGCCGGAT GTATGCACCG GACCGCCATG
TATGCCATGA AAAAGGTCTT TCGGGATGCG ATATTCCCAA GTGACATCGG CTGTTACACC
CTTGGTATCC AGCTGGGAAC AGTCGACACG ACCATCTGTA TGGGTGCTTC AATAACGGTA
GCATCAGGGA TGTCTCTTGC CGGAGAGAAA CGGGATATTG TCTGTACGAT TGGTGACTCA
ACCTTCCTCC ATACCGGAAT ACAGGGTCTT ATCAATGCTA TATACAATGG CGCAAACATA
ACGGTGGTCA TCCTTGATAA CCGGATCACC GCAATGACCG GGCATCAGCC AAATCCGACA
ACCGGGCTGA CTGCTTGCGG CGTTGCAACC CCGGCAGTCT CAATTGAAGC GATCTGTCGG
GCAAGTGGTG CAACATTTGT CGAGACGGTC AGTCCAAATG ACCTGGTCAC CTTCATCGAT
GTCCTGAAGG CTGCAAAAGC CCTTCCCGGC GTAAAGGTTA TCATCGCACG CCAGCCCTGT
GTAATATCTG AAAAACGTTC CCGGGTTGTT CGTGGCCGCT ACACCGTTTA CCAGGATCGG
TGCATCGGAT GTAAAGCCTG TATCAAGTTC GGATGCCCGG CAATAGAACT GAAAGGTGGT
CTTGCATCCA TCACTGATCT CTGTTCAGGC TGCGGAGTAT GTGTGCAGAT ATGCCCGGTT
GGTGCCATCG GCAGGGAGGT GAAGGAATGA
 
Protein sequence
MVVQYLLGNE AIAHGCLEAA VDVACGYPGT PSSEVIDTLR MDPDRACKVE WSVNEKVAFE 
EALAVSWCGL RAICTMKHVG LNVAADPLMT SAYTGTKGGF VIMSADDPYA HSSQNEQDSR
CYAKFARIPC LDPSTLQEAH DMVRDAFALS EEFSLPVMFR PTTRICHSKS DVNLGDVVVS
ERTASFEKNA RQYVVIPAHT RILHQKLNKK QHALKKRLVE LGYNRYEVKG KKAVICGGVG
ASYVREVIGP DVSVAIIGAY PIDEDWLREF ISHHKEVMVI EELSPVIEEV ARQVSGTIPV
FGKMTGHVPY EGELAPDRVA GYLKAAGFAV SVTYQPAATP AALPVRPPIL CAGCMHRTAM
YAMKKVFRDA IFPSDIGCYT LGIQLGTVDT TICMGASITV ASGMSLAGEK RDIVCTIGDS
TFLHTGIQGL INAIYNGANI TVVILDNRIT AMTGHQPNPT TGLTACGVAT PAVSIEAICR
ASGATFVETV SPNDLVTFID VLKAAKALPG VKVIIARQPC VISEKRSRVV RGRYTVYQDR
CIGCKACIKF GCPAIELKGG LASITDLCSG CGVCVQICPV GAIGREVKE