| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2270 |
|---|
| Symbol | |
|---|
| ID | 3924629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 2534218 |
|---|
| End bp | 2536740 |
|---|
| Gene Length | 2523 bp |
|---|
| Protein Length | 840 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637897879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_503694 |
|---|
| Protein GI | 88603516 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.807987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGT CCTCAATTAG CCGTTTAAAT ATCCTTTTAG GTATAATTGT TTTTTGTTTT
GTGATATTAG GGTTATGGAT TCGATTATTG CCATCGGATT TTCTCCTAGA GTCGATACAG
CCCATAGTCT CATCGACAGA TCCTTGGTAT ACCGTCCGAC AAGTAGAACA AATAATTCAT
CATTTTCCGA ATTACTCATG GTTTGATCCA TTCTTATCTT ATCCAAATGG TAAGATTGTT
GATTGGGGGC CGGTATTCCC TTTGTTTAGC AGTTTAATTG CTTTAATACT AAATGCTTCT
ATCCAGGGCG ATATTATTCG TGCAATTTCA TGGGTTCCTG TCATTTTGGG TATGGTTCTC
ATTCCTCTCT GTTATATGTT CGGTAAAATA ATTTGGGATG TTAAAGCCGG CTGGTTCGCT
GCGATCTTAA TATGTGTTGT CGGGGGAGAA ACCCTCTTCA GGTCATTTTT TGGTGATGTC
GATCATCATA TAATGGAGGT TGTCGTAACT TCTTCTTTTT TTATCAGTTA TTTTATCTTA
TTATCCTACT TTAATGCTAA TAATAATAAC AGAACCAAAT GGAAGGCACC TTTATCTACA
AAGAGTTGGT CACATCACTA TTTTGGGAAT TCTAAAATCC AGAATCTGGT AATAGTACTT
TCAATAATTT GTGGCATTCT CTATTACCTG GCTATTATGA CGATGCCTAC TTGTACCTTA
ATTGCAATAA TTATTGCCCT ATTTACATTT TTCCTACCAG TTCTTATTAC AGAAAAATCA
GACTATAGTC GGATTTTTGT AATGAATGGG ATAATTTTTG GCCTGTTCAT AATTTTATTT
GCTTTAAGCG GGATCCAGGT ATCAGGGTGG TCATTAGGGC AATATTCGAT AATTCATCTT
TTCATTCCTG CAGGAATAAT TGCTGAATCA GGTATTCTTT ATATATTATC GAGATTCATA
GTTGCAAAAA ATAGGTTTTT TTATACAGGA ATATTGTTAA TGATATTTTT TGTTTTCTCG
GCCTTATTAA TTTTAATTAA TTCGGAAATT TCTAATAGTT TTACAAATAT GGTAACTAGA
TTTTTTGCGC TAAATGGTAC CTCTGTAACA ATTCAAGAGA TGCAATCATC CAATATTTTC
ACGTTTCTAA AAGTTTTTAA TATTACTGCA ATTCTTTCCT GTTTTGGATT CTTAATATTA
TGTTTCCAAT TTTATCGGAC GAAAAATCCA CTTAATTTAG CTGTTATTAT ATGGGCATCA
GTCTATATAG TAATAAGTTT ACTAGTTGTC CGATTTCAAT ATTATAGTGG TGAAATTTTT
GTCATATTGG CTGGAGTATT TCTTTCCGCA CTGTACGATA AAATTCAGGT AAGGCATCAT
AAAATTCAAA AAGATAATAA AAATAAATTT TTCTGGAAAA TAATTTTTAT TAATAACAAG
GGTATTCTTT GCATTGGTTT TTTAATAACT ATGATCACTA TTCTCTCTAT TCCTGTTGCG
ATGGAGGTTG GATTAAATGA AACTCCTAAA GATTCTATAA ATGATGAATG GATTCAATCA
TTAAAATGGT TATCTCAGCA AAATAACACC GATGTTCCTG ATTATTATTC AATCTATAAG
GAATCTTTTT CATATCCCCA AAATATATCA ACGGTAATAT CTTGGTGGAC TAGTGGGCAC
TGGATCCTTG TCTTGGCTCA TAAAATTCCT GCAACCTCTC CTTTTCAGGA TAATATCGTT
CCTGTAGCTA AGTTCCTCCT TGCTGATTCT AATATTCAAG CAGAAATGAT CGCCTCACAA
TTACATGGAA AATATATTAT TACTACAAAT GAGTATTTAT TTAACGATTT TCCCATGATT
CAAAAATGGA TACCTGCACA ACCAGATGAA GATCCTTATT ATTTTGTTTT TTATAATCGA
GCAAGTAAAA CCTCTTCGAT ACTTACTCCG ATGCTAGGAA TGAAACCCGC ATTTTTTAAT
ACTACTCTTG TTAAGCTTCA CGCTAATGAT GGGTCGTATG TGCACGCCAA TGGCAGTGTG
GTTATTCAAT ATCAAAGCAC AATCGTGTCA GGTAAAGAAG TTCCTCTCCT TCAAAAGATG
TATCCCATTG ATCAGACCCA GACAATTCAA TTCTTGTCTC AACCTTGGTC TAACACAGAG
ATAATATCTC TGATGTACAC CTCCCCCATC ACCGACACCC CAGCCCTCAA AAACTACCGT
CTCATCTATG AATCTAATGG AACCCAAACC TTCCCTGGCG ACGTAACCCT CAACAACATC
AAGATCTTCG AACGGGTCAA GGGATACACC ATCCCCGGAA CCGGAACCAT CGAAGTCCCC
ATCGTAACGA ACCAGGGCCG TCATTTCACC TACCGTCAGC AGAGTGAGAA TGGCACCTTT
ACTCTCCCCT ATGCAACTAC GAATTCCCCA TATGATGTCA AAACAACCGG GCCCTATCGT
ATCATAGAAA CAAACCAAAC TATTGATGTT GATGAATCAC AGATAGAGAA GTACTATACA
TAA
|
|---|
| Protein sequence | MNLSSISRLN ILLGIIVFCF VILGLWIRLL PSDFLLESIQ PIVSSTDPWY TVRQVEQIIH
HFPNYSWFDP FLSYPNGKIV DWGPVFPLFS SLIALILNAS IQGDIIRAIS WVPVILGMVL
IPLCYMFGKI IWDVKAGWFA AILICVVGGE TLFRSFFGDV DHHIMEVVVT SSFFISYFIL
LSYFNANNNN RTKWKAPLST KSWSHHYFGN SKIQNLVIVL SIICGILYYL AIMTMPTCTL
IAIIIALFTF FLPVLITEKS DYSRIFVMNG IIFGLFIILF ALSGIQVSGW SLGQYSIIHL
FIPAGIIAES GILYILSRFI VAKNRFFYTG ILLMIFFVFS ALLILINSEI SNSFTNMVTR
FFALNGTSVT IQEMQSSNIF TFLKVFNITA ILSCFGFLIL CFQFYRTKNP LNLAVIIWAS
VYIVISLLVV RFQYYSGEIF VILAGVFLSA LYDKIQVRHH KIQKDNKNKF FWKIIFINNK
GILCIGFLIT MITILSIPVA MEVGLNETPK DSINDEWIQS LKWLSQQNNT DVPDYYSIYK
ESFSYPQNIS TVISWWTSGH WILVLAHKIP ATSPFQDNIV PVAKFLLADS NIQAEMIASQ
LHGKYIITTN EYLFNDFPMI QKWIPAQPDE DPYYFVFYNR ASKTSSILTP MLGMKPAFFN
TTLVKLHAND GSYVHANGSV VIQYQSTIVS GKEVPLLQKM YPIDQTQTIQ FLSQPWSNTE
IISLMYTSPI TDTPALKNYR LIYESNGTQT FPGDVTLNNI KIFERVKGYT IPGTGTIEVP
IVTNQGRHFT YRQQSENGTF TLPYATTNSP YDVKTTGPYR IIETNQTIDV DESQIEKYYT
|
|---|
| |